RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 P4HA2O15460 535 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00547-201ENST00000612438 GLI1P08151 1106 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 OR52Z1P0C646 297 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 TROVE2P10155 538 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00547-201ENST00000612438 BCRP11274 1271 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 SP100P23497 879 aaPredicted RBP9.51□□□□□ -0.89
LINC00547-201ENST00000612438 MECOMQ03112 1051 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 MAN2A1Q16706 1144 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 CFAP221Q4G0U5 840 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 INTS5Q6P9B9 1019 aaKnown RBP9.51□□□□□ -0.89
LINC00547-201ENST00000612438 ANKRD13CQ8N6S4 541 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 MS4A14Q96JA4 679 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 IL17RBQ9NRM6 502 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 BARHL2Q9NY43 387 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
LINC00547-201ENST00000612438 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
LINC00547-201ENST00000612438 ITGB4P16144 1822 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 ZNF233A6NK53 670 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 SUPT3HO75486 399 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 KRT14P02533 472 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CARSP49589 748 aaKnown RBP9.5□□□□□ -0.89
LINC00547-201ENST00000612438 TUBP50607 506 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 TFAP4Q01664 338 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 RASSF7Q02833 373 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CFAP58Q5T655 872 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 HEATR3Q7Z4Q2 680 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CD302Q8IX05 232 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CROTQ9UKG9 612 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 DAAM1Q9Y4D1 1078 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 ABCB11O95342 1321 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.5□□□□□ -0.89
LINC00547-201ENST00000612438 SSU72P8A0A1W2PR75 194 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 EIF3FO00303 357 aaPredicted RBP9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CYTH3O43739 400 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 LGR5O75473 907 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 TRIM37O94972 964 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 PDHA1P08559 390 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 FUT4P22083 530 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 HOXD12P35452 270 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 MLH1P40692 756 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 PDXDC1Q6P996 788 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 SLC15A3Q8IY34 581 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 MREGQ8N565 214 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
LINC00547-201ENST00000612438 EDEM3Q9BZQ6 932 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 DDX25Q9UHL0 483 aaKnown RBP9.5□□□□□ -0.89
LINC00547-201ENST00000612438 NFU1Q9UMS0 254 aa9.5□□□□□ -0.89
LINC00547-201ENST00000612438 TMEM247A6NEH6 219 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 CCT8L1PA6NM43 557 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FGFR1OPO95684 399 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FAM153BP0C7A2 387 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 GSTT1P30711 240 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FLT3P36888 993 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 USP46P62068 366 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 GFPT1Q06210 699 aaPredicted RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FAM153CQ494X1 144 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 USH1GQ495M9 461 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 THOC7Q6I9Y2 204 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FBXO33Q7Z6M2 555 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 ARHGAP18Q8N392 663 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 ANKS4BQ8N8V4 417 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 NR1H4Q96RI1 486 aaPredicted RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 RPS6KC1Q96S38 1066 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 TAOK3Q9H2K8 898 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 EPB41L5Q9HCM4 733 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 DLGAP2Q9P1A6 1054 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 FAM153AQ9UHL3 310 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 NIP7Q9Y221 180 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 LRRC42Q9Y546 428 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 RBAK-RBAKDNI3L0D1 243 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 BUB1O43683 1085 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 HOXA10P31260 410 aaPredicted RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 TECP42680 631 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 ATP11AP98196 1134 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 PAK2Q13177 524 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 HGSNATQ68CP4 663 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 CPLX4Q7Z7G2 160 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 C1orf131Q8NDD1 294 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 A0A1B0GUL6 1792 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 SRCAPQ6ZRS2 3230 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 PVALEFA0A1B0GWK0 134 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 C5orf60A6NFR6 353 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 KCNQ2O43526 872 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 TRAPPC3O43617 180 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 HEXIM1O94992 359 aaKnown RBP9.49□□□□□ -0.89
LINC00547-201ENST00000612438 RFC5P40937 340 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 SLC1A4P43007 532 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 NEK2P51955 445 aa9.49□□□□□ -0.89
LINC00547-201ENST00000612438 GUCY2DQ02846 1103 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms