RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 HOMEZQ8IX15 550 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 BTNL10A8MVZ5 291 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 PHACTR2O75167 634 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 NR2F2P24468 414 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 NF2P35240 595 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 IREB2P48200 963 aaKnown RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 KNOP1Q1ED39 458 aaKnown RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 DPY19L2P1Q6NXN4 242 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 GSPT2Q8IYD1 628 aaKnown RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 ANKRD13CQ8N6S4 541 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 ATG4CQ96DT6 458 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 STIM2Q9P246 746 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 DNM3Q9UQ16 869 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 AGPSO00116 658 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 VWA5AO00534 786 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 NFIBO00712 420 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 PDXKO00764 312 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 NCK2O43639 380 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 IVLP07476 585 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 CYP3A4P08684 503 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 CXCR5P32302 372 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 CASP5P51878 434 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 CFAP221Q4G0U5 840 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 C10orf76Q5T2E6 689 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 EMBQ6PCB8 327 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 MCF2L2Q86YR7 1114 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 SNCAIPQ9Y6H5 919 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 ATP8B3O60423 1300 aa16.08■□□□□ 0.16
CDH1-213ENST00000612417 GRID2IPA4D2P6 1211 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 BUB1O43683 1085 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 FDX1P10109 184 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 HOXD13P35453 343 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 GGCXP38435 758 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 EPHB4P54760 987 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 RAPGEF1Q13905 1077 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 ASIC2Q16515 512 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 C12orf42Q96LP6 360 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 FBXL5Q9UKA1 691 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 RBBP6Q7Z6E9 1792 aaKnown RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 A0A087X0T9 212 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 GOLGA6BA6NDN3 693 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 CLSTN1O94985 981 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 FAM228BP0C875 321 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 KLRC1P26715 233 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 PSMC6P62333 389 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 COG2Q14746 738 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 GPIHBP1Q8IV16 184 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 DHX37Q8IY37 1157 aaKnown RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 CAVIN3Q969G5 261 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 CDCA5Q96FF9 252 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 WNK4Q96J92 1243 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 TRERF1Q96PN7 1200 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 ARMCX3Q9UH62 379 aaPredicted RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 VAV3Q9UKW4 847 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 BZW2Q9Y6E2 419 aaKnown RBP16.07■□□□□ 0.16
CDH1-213ENST00000612417 PARP14Q460N5 1801 aa16.07■□□□□ 0.16
CDH1-213ENST00000612417 COL11A1P12107 1806 aaPredicted RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 MSH4O15457 936 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 CALUO43852 315 aaPredicted RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 PALMO75781 387 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 ANXA13P27216 316 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 HSD17B4P51659 736 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 PABPC4Q13310 644 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDH1-213ENST00000612417 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 FAM133AQ8N9E0 248 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 PSMB7Q99436 277 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 RBM12Q9NTZ6 932 aaKnown RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 CES2O00748 559 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 SLC16A3O15427 465 aaKnown RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 AFPP02771 609 aaKnown RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 DSG3P32926 999 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 NAP1L1P55209 391 aaKnown RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 APBA1Q02410 837 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 NNTQ13423 1086 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 IRF2BP2Q7Z5L9 587 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
CDH1-213ENST00000612417 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
CDH1-213ENST00000612417 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms