RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ZBTB10Q96DT7 871 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 C1orf112Q9NSG2 853 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 VAV3Q9UKW4 847 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 RWDD3Q9Y3V2 267 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 SIP14410 1827 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 VTNP04004 478 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 RFC5P40937 340 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TAP1Q03518 808 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 ST3GAL1Q11201 340 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 UGCGQ16739 394 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 EARS2Q5JPH6 523 aaKnown RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 B3GNT9Q6UX72 402 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 NOSTRINQ8IVI9 506 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 C4orf19Q8IY42 314 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 CEP170P1Q96L14 293 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 OSMRQ99650 979 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 LXNQ9BS40 222 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 ZBTB42B2RXF5 422 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
CBWD3-208ENST00000612050 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 TMCO2Q7Z6W1 182 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-208ENST00000612050 NPAS4Q8IUM7 802 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 TPH2Q8IWU9 490 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 FIBCD1Q8N539 461 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 HAS1Q92839 578 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 PPP1R16BQ96T49 567 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-208ENST00000612050 CERS4Q9HA82 394 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 CYP26B1Q9NR63 512 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
CBWD3-208ENST00000612050 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-208ENST00000612050 EML1O00423 815 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 ENPP3O14638 875 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-208ENST00000612050 CYP4A11Q02928 519 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 HAUS3Q68CZ6 603 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 PPM1EQ8WY54 764 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 DYDC2Q96IM9 177 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 AGO3Q9H9G7 860 aaKnown RBP13.79□□□□□ -0.2
CBWD3-208ENST00000612050 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
CBWD3-208ENST00000612050 LINC01553A4QN01 128 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 MAFO75444 373 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 IBSPP21815 317 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 SFPQP23246 707 aaKnown RBP eCLIP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 GJB2P29033 226 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 ERVK-21P61565 698 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 SKIV2LQ15477 1246 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 PTPROQ16827 1216 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 PSPC1Q8WXF1 523 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 NOC2LQ9Y3T9 749 aaKnown RBP13.78□□□□□ -0.2
CBWD3-208ENST00000612050 ADGRA3Q8IWK6 1321 aa13.78□□□□□ -0.2
CBWD3-208ENST00000612050 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 LAD1O00515 517 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ASAP2O43150 1006 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 HOXA2O43364 376 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 GPR32O75388 356 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 PDCP20941 246 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.21
CBWD3-208ENST00000612050 GPC3P51654 580 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.21
CBWD3-208ENST00000612050 CTTNQ14247 550 aaKnown RBP13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ZNF174Q15697 407 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ANO5Q75V66 913 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ABI1Q8IZP0 508 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 MTRQ99707 1265 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ADAM2Q99965 735 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 BACH2Q9BYV9 841 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 RGL1Q9NZL6 768 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms