RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.58□□□□□ -0.24
CBWD1-220ENST00000612045 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ESPNB1AK53 854 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 NOP56O00567 594 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PDXKO00764 312 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 DGAT1O75907 488 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 MAPTP10636 758 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PLS3P13797 630 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 STAT5BP51692 787 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 GSDMDP57764 484 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 GRM1Q13255 1194 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 EDRF1Q3B7T1 1238 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ZC2HC1CQ53FD0 456 aaPredicted RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 SPATA33Q96N06 139 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 UBE4BO95155 1302 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PBX1P40424 430 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 KCNA1Q09470 495 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 ZC3H3Q8IXZ2 948 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 MSL3Q8N5Y2 521 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 CEP63Q96MT8 703 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 STRA6Q9BX79 667 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 NIFKQ9BYG3 293 aaKnown RBP13.57□□□□□ -0.24
CBWD1-220ENST00000612045 AZI2Q9H6S1 392 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 DOCK3Q8IZD9 2030 aa13.57□□□□□ -0.24
CBWD1-220ENST00000612045 PCNTO95613 3336 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 CALUO43852 315 aaPredicted RBP13.56□□□□□ -0.24
CBWD1-220ENST00000612045 LGR5O75473 907 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 PPP1R37O75864 691 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
CBWD1-220ENST00000612045 ARHGAP1Q07960 439 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 MTERF2Q49AM1 385 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 MCPH1Q8NEM0 835 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
CBWD1-220ENST00000612045 TYW1Q9NV66 732 aaKnown RBP13.56□□□□□ -0.24
CBWD1-220ENST00000612045 LGALS16A8MUM7 142 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 K7ENM7 598 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 CA12O43570 354 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 GNA14O95837 355 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 TPM2P07951 284 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 HOXC6P09630 235 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 NR2F2P24468 414 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 MSNP26038 577 aaKnown RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ADCYAP1R1P41586 468 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 UBXN1Q04323 297 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 LRMPQ12912 555 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ADAM9Q13443 819 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 CCDC150Q8NCX0 1101 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 USP6NLQ92738 828 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 GLG1Q92896 1179 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 XPNPEP1Q9NQW7 623 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 CETN3O15182 167 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 GH1P01241 217 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 POLGP54098 1239 aaPredicted RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 PEX3P56589 373 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 SOX10P56693 466 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ALCAMQ13740 583 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 GJC2Q5T442 439 aaPredicted RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 FAM167AQ96KS9 214 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
CBWD1-220ENST00000612045 ST6GALNAC4Q9H4F1 302 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 C17orf75Q9HAS0 396 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
CBWD1-220ENST00000612045 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.54□□□□□ -0.24
CBWD1-220ENST00000612045 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
CBWD1-220ENST00000612045 SFPQP23246 707 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms