RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PARP2Q9UGN5 583 aa14.23□□□□□ -0.13
TCF3-220ENST00000611869 MSH4O15457 936 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 CYP11B2P19099 503 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 BAATQ14032 418 aaPredicted RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 GPR162Q16538 588 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 FAM163AQ96GL9 167 aaPredicted RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 FAM213AQ9BRX8 229 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 RAB20Q9NX57 234 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 EMSYQ7Z589 1322 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 HOXA10P31260 410 aaPredicted RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 YARSP54577 528 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 PSMC5P62195 406 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 MDM2Q00987 491 aaPredicted RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 DMTNQ08495 405 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 RNF10Q8N5U6 811 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 ANKS1AQ92625 1134 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 CABS1Q96KC9 395 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 CNOT7Q9UIV1 285 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 A6NNZ2 444 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 TUBB8Q3ZCM7 444 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 APOBEC3HQ6NTF7 200 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 CCDC63Q8NA47 563 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 NUDT12Q9BQG2 462 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 MSTO1Q9BUK6 570 aa14.22□□□□□ -0.13
TCF3-220ENST00000611869 INTS2Q9H0H0 1204 aaKnown RBP14.22□□□□□ -0.13
TCF3-220ENST00000611869 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 RSPH10BP0C881 870 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 YWHAEP62258 255 aaKnown RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 TERF2Q15554 542 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 STXBP2Q15833 593 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 SAMD7Q7Z3H4 446 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 DEFB132Q7Z7B7 95 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 IPO4Q8TEX9 1081 aaKnown RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 ADPGKQ9BRR6 497 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 SEMA6BQ9H3T3 888 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 UCHL3P15374 230 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 DHX9Q08211 1270 aaKnown RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ZNF354CQ86Y25 554 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ERGIC2Q96RQ1 377 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 TACC3Q9Y6A5 838 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 GOLGA8SH3BPF8 625 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ATP5DP30049 168 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 SLC8A3P57103 927 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 ZBTB16Q05516 673 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 VPS37BQ9H9H4 285 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
TCF3-220ENST00000611869 AKT3Q9Y243 479 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 FHOD1Q9Y613 1164 aa14.21□□□□□ -0.13
TCF3-220ENST00000611869 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.14
TCF3-220ENST00000611869 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 KRT15P19012 456 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 ZNF394Q53GI3 561 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 CCDC89Q8N998 374 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 SMARCAL1Q9NZC9 954 aa14.21□□□□□ -0.14
TCF3-220ENST00000611869 P4HA1P13674 534 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 YWHABP31946 246 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 FUT2Q10981 343 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 ZNF211Q13398 564 aaPredicted RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 DPP9Q86TI2 863 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 SPATA4Q8NEY3 305 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 RASSF4Q9H2L5 321 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 L2HGDHQ9H9P8 463 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 ADAM21Q9UKJ8 722 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 SNX12Q9UMY4 172 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 PCDHA10Q9Y5I2 948 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 PASKQ96RG2 1323 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 INPP5BP32019 993 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 E2F4Q16254 413 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 EDRF1Q3B7T1 1238 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 NOA1Q8NC60 698 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 DDX47Q9H0S4 455 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 SFNP31947 248 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 SLC18A3Q16572 532 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 SGO2Q562F6 1265 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 TAOK1Q7L7X3 1001 aa14.2□□□□□ -0.14
TCF3-220ENST00000611869 RPUSD2Q8IZ73 545 aaKnown RBP14.2□□□□□ -0.14
TCF3-220ENST00000611869 APOL6Q9BWW8 343 aa14.19□□□□□ -0.14
TCF3-220ENST00000611869 EHD4Q9H223 541 aa14.19□□□□□ -0.14
TCF3-220ENST00000611869 FAM114A2Q9NRY5 505 aa14.19□□□□□ -0.14
TCF3-220ENST00000611869 PCDHAC2Q9Y5I4 1007 aa14.19□□□□□ -0.14
TCF3-220ENST00000611869 DUSP10Q9Y6W6 482 aa14.19□□□□□ -0.14
TCF3-220ENST00000611869 MORC2Q9Y6X9 1032 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms