RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 PRIMPOLQ96LW4 560 aa24.62■■□□□ 1.53
UBE3C-209ENST00000611269 NACC1Q96RE7 527 aa24.62■■□□□ 1.53
UBE3C-209ENST00000611269 MAFBQ9Y5Q3 323 aaPredicted RBP24.62■■□□□ 1.53
UBE3C-209ENST00000611269 ZNF862O60290 1169 aa24.61■■□□□ 1.53
UBE3C-209ENST00000611269 UTP14CQ5TAP6 766 aaKnown RBP24.61■■□□□ 1.53
UBE3C-209ENST00000611269 UNC13DQ70J99 1090 aa24.61■■□□□ 1.53
UBE3C-209ENST00000611269 C4orf19Q8IY42 314 aa24.61■■□□□ 1.53
UBE3C-209ENST00000611269 KCTD17Q8N5Z5 321 aa24.61■■□□□ 1.53
UBE3C-209ENST00000611269 DUSP11O75319 330 aaKnown RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 LYPLA2O95372 231 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 MMP3P08254 477 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 TCP11X2Q5H9J9 407 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 TRIM50Q86XT4 487 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 CCAR2Q8N163 923 aaKnown RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 AZI2Q9H6S1 392 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 Q9Y3F1 56 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 TEX33O43247 280 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 LGR5O75473 907 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 PLA2G4BP0C869 781 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 YWHABP31946 246 aaKnown RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 CTCFP49711 727 aaPredicted RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 STAT5BP51692 787 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 IRX5P78411 483 aaPredicted RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 KRT31Q15323 416 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 FAM160B1Q5W0V3 765 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 ANKRD20A12PQ8NF67 263 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 AFAP1L1Q8TED9 768 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 SH3TC2Q8TF17 1288 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 NOC3LQ8WTT2 800 aaKnown RBP24.6■■□□□ 1.53
UBE3C-209ENST00000611269 BHMT2Q9H2M3 363 aa24.6■■□□□ 1.53
UBE3C-209ENST00000611269 LOXHD1Q8IVV2 1947 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 EMSYQ7Z589 1322 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 EYA4O95677 639 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 SSBP05455 408 aaKnown RBP eCLIP24.59■■□□□ 1.53
UBE3C-209ENST00000611269 TPM2P07951 284 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 PRKCEQ02156 737 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 STK4Q13043 487 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 TTI2Q6NXR4 508 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 GLG1Q92896 1179 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 AP5M1Q9H0R1 490 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 THAP9Q9H5L6 903 aa24.59■■□□□ 1.53
UBE3C-209ENST00000611269 TMEM150BA6NC51 233 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 KCNJ18B7U540 433 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 DKC1O60832 514 aaKnown RBP eCLIP24.58■■□□□ 1.53
UBE3C-209ENST00000611269 PPFIA4O75335 1185 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 ATP4AP20648 1035 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 CCNE1P24864 410 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 SLC12A3P55017 1021 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 KCNJ12Q14500 433 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 IRF2BP1Q8IU81 584 aa24.58■■□□□ 1.53
UBE3C-209ENST00000611269 BRCA2P51587 3418 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 BICDL2A1A5D9 508 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 A6NJR5 290 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 LGALS2P05162 132 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 RARBP10826 455 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 HOXD8P13378 290 aaPredicted RBP24.58■■□□□ 1.52
UBE3C-209ENST00000611269 PMS1P54277 932 aaKnown RBP24.58■■□□□ 1.52
UBE3C-209ENST00000611269 PSMD2Q13200 908 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 PTPN21Q16825 1174 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 P2RX5Q93086 422 aa24.58■■□□□ 1.52
UBE3C-209ENST00000611269 STBD1O95210 358 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 ZNF286BP0CG31 522 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 COPB1P53618 953 aaKnown RBP24.57■■□□□ 1.52
UBE3C-209ENST00000611269 DGKDQ16760 1214 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 E4F1Q66K89 784 aaPredicted RBP24.57■■□□□ 1.52
UBE3C-209ENST00000611269 ANO5Q75V66 913 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 SYT2Q8N9I0 419 aaPredicted RBP24.57■■□□□ 1.52
UBE3C-209ENST00000611269 TC2NQ8N9U0 490 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 SMARCAD1Q9H4L7 1026 aa24.57■■□□□ 1.52
UBE3C-209ENST00000611269 ITIH6Q6UXX5 1313 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 TRIM49BA6NDI0 452 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 USP27XA6NNY8 438 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 EEF1GP26641 437 aaKnown RBP24.56■■□□□ 1.52
UBE3C-209ENST00000611269 MARK3P27448 753 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 CPT1AP50416 773 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 BEX3Q00994 111 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 EHHADHQ08426 723 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 PLA2G4FQ68DD2 849 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 PLPPR4Q7Z2D5 763 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 CTU1Q7Z7A3 348 aaKnown RBP24.56■■□□□ 1.52
UBE3C-209ENST00000611269 SH2D3AQ9BRG2 576 aa24.56■■□□□ 1.52
UBE3C-209ENST00000611269 OATP04181 439 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 GJA9P57773 515 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 FSCN1Q16658 493 aaKnown RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 SLC9C1Q4G0N8 1177 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 NYAP1Q6ZVC0 841 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 TMEM139Q8IV31 216 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 DDX12PQ92771 950 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 DUSP9Q99956 384 aaKnown RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 C16orf70Q9BSU1 422 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 HMX1Q9NP08 348 aaPredicted RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 SEPT9Q9UHD8 586 aaPredicted RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 DDX20Q9UHI6 824 aaKnown RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 DBR1Q9UK59 544 aaKnown RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 N4BP3O15049 544 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 PGK1P00558 417 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 C6orf222P0C671 652 aaPredicted RBP24.55■■□□□ 1.52
UBE3C-209ENST00000611269 RARRES1P49788 294 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 XKR3Q5GH77 459 aa24.55■■□□□ 1.52
UBE3C-209ENST00000611269 GPBP1Q86WP2 473 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms