RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FBXL16Q8N461 479 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 TCP11Q8WWU5 503 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 MXRA8Q9BRK3 442 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 RAB17Q9H0T7 212 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 RIOX1Q9H6W3 641 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CEP72Q9P209 647 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 FZD1Q9UP38 647 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF148Q9UQR1 794 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 TMX2Q9Y320 296 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 ANKRD26Q9UPS8 1709 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 XPOTO43592 962 aaKnown RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ADCY8P40145 1251 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 VAMP7P51809 220 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 KRT81Q14533 505 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 BRD3Q15059 726 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 CASC4Q6P4E1 433 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 IRX2Q9BZI1 471 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 STIM2Q9P246 746 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 PTPN22Q9Y2R2 807 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 JRKLQ9Y4A0 524 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 MRC1P22897 1456 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 MYBP10242 640 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ARL1P40616 181 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ANKRD13AQ8IZ07 590 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 RNF149Q8NC42 400 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 RABGGTAQ92696 567 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 CCDC97Q96F63 343 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 CHP1Q99653 195 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ADGRG1Q9Y653 693 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 PHLPP2Q6ZVD8 1323 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 EMSYQ7Z589 1322 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 SRGAP2O75044 1071 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 SEC31AO94979 1220 aaKnown RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 TBC1D8O95759 1140 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 LDHAP00338 332 aaKnown RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ZSCAN20P17040 1043 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 OAS2P29728 719 aaKnown RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 FXR1P51114 621 aaKnown RBP eCLIP7.87□□□□□ -1.151e-6■■■□□ 18.2
CSDE1-218ENST00000610726 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.155e-7■□□□□ 10.4
CSDE1-218ENST00000610726 DRAP1Q14919 205 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ILDR1Q86SU0 546 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 AFAP1L1Q8TED9 768 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 MAIP1Q8WWC4 291 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 RSAD2Q8WXG1 361 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 A0A1B0GTH6 734 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 NFIBO00712 420 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ABCD1P33897 745 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 BACE1P56817 501 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 C2orf54Q08AI8 447 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 TAF1CQ15572 869 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-218ENST00000610726 PASD1Q8IV76 773 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 ABI1Q8IZP0 508 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 AGPAT5Q9NUQ2 364 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 HPSEQ9Y251 543 aa7.87□□□□□ -1.15
CSDE1-218ENST00000610726 PDXKO00764 312 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 ICAM1P05362 532 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 SNX1Q13596 522 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 TMEM270Q6UE05 265 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CYP2W1Q8TAV3 490 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 IDI2Q9BXS1 227 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 NKIRAS1Q9NYS0 192 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 KNDC1Q76NI1 1749 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 EBAG9O00559 213 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 TNPO2O14787 897 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 VIMP08670 466 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 ARP10275 920 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 VCAM1P19320 739 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 HUNKP57058 714 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 ZBTB16Q05516 673 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 GRB10Q13322 594 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 SNAPC2Q13487 334 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CLUL1Q15846 466 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CRY2Q49AN0 593 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 XKR3Q5GH77 459 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF667Q5HYK9 610 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CEP85LQ5SZL2 805 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 DNAJC24Q6P3W2 148 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 SEPT1Q8WYJ6 367 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 SNX25Q9H3E2 840 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 VPS37BQ9H9H4 285 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 EPB41L5Q9HCM4 733 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 PPANQ9NQ55 473 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 LIMA1Q9UHB6 759 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 HGSO14964 777 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 GRIN3BO60391 1043 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 MED24O75448 989 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 DGAT1O75907 488 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 HEXIM1O94992 359 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 PHKA2P46019 1235 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 RNASELQ05823 741 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms