RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 HS3ST3A1Q9Y663 406 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 DVL2O14641 736 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 LAMTOR5O43504 91 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 FAHP16930 419 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 SLC9A1P19634 815 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 TMPRSS15P98073 1019 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 KIAA2012Q0VF49 1180 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 ADAM9Q13443 819 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 R3HDM1Q15032 1099 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 SEC23AQ15436 765 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 SPATS2Q86XZ4 545 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 PALM2Q8IXS6 379 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 DNERQ8NFT8 737 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 SCYL1Q96KG9 808 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 CDK5RAP1Q96SZ6 601 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 ACSS2Q9NR19 701 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 DDX56Q9NY93 547 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 SPO11Q9Y5K1 396 aa5.91□□□□□ -1.46
SMCHD1-213ENST00000609587 PRAMEF25A6NGN4 478 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 ACOT7O00154 380 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 B4GALT3O60512 393 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 C4BPAP04003 597 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 GUCY2FP51841 1108 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 MCTP2Q6DN12 878 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 CC2D1AQ6P1N0 951 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 NECAB2Q7Z6G3 386 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 STK32CQ86UX6 486 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 FAM124AQ86V42 546 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 PROSER1Q86XN7 944 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 WRNIP1Q96S55 665 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 ELF4Q99607 663 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 TOMM22Q9NS69 142 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 SLC5A4Q9NY91 659 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 WASF3Q9UPY6 502 aa5.9□□□□□ -1.46
SMCHD1-213ENST00000609587 PHLDB1Q86UU1 1377 aa5.9□□□□□ -1.47
SMCHD1-213ENST00000609587 FOXP2O15409 715 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 GPR42O15529 346 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 TGM5O43548 720 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 ULK1O75385 1050 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 CYP7B1O75881 506 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 CYP17A1P05093 508 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 IQSEC1Q6DN90 963 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 ZNF585AQ6P3V2 769 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 HDGFL2Q7Z4V5 671 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 TXNDC5Q8NBS9 432 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 SLC5A5Q92911 643 aa5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 TYW1Q9NV66 732 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-213ENST00000609587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 PTX3P26022 381 aaPredicted RBP5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 SDHAP31040 664 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 HERVK_113P62684 666 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 DDB1Q16531 1140 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 SPDYAQ5MJ70 313 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 DTX3Q8N9I9 347 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 COG1Q8WTW3 980 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 STAG1Q8WVM7 1258 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 DLL4Q9NR61 685 aa5.88□□□□□ -1.47
SMCHD1-213ENST00000609587 KATNA1O75449 491 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 MMEP08473 750 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 PDGFRBP09619 1106 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 ZNF28P17035 718 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 LSP1P33241 339 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 FNTBP49356 437 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 SELENOPP49908 381 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 SESN3P58005 492 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 SMAD3P84022 425 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 SMAD2Q15796 467 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 BRDTQ58F21 947 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 CATSPEREQ5SY80 951 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 BROXQ5VW32 411 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 CD276Q5ZPR3 534 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 TMC5Q6UXY8 1006 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 ZZZ3Q8IYH5 903 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 GBP4Q96PP9 640 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 PUS7LQ9H0K6 701 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 RBPJLQ9UBG7 517 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 WASHC2CQ9Y4E1 1318 aa5.87□□□□□ -1.47
SMCHD1-213ENST00000609587 RASSF10A6NK89 507 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 RAB11FIP3O75154 756 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 PRKD3O94806 890 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 CHGBP05060 677 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 PHC1P78364 1004 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 DBPQ10586 325 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 FAPQ12884 760 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 TERF2Q15554 542 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 GPR158Q5T848 1215 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 HIPK4Q8NE63 616 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 IGDCC4Q8TDY8 1250 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 ASB15Q8WXK1 588 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 ERCC4Q92889 916 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 LCORQ96JN0 433 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 CEP89Q96ST8 783 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 ZMAT4Q9H898 229 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms