RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 OATP04181 439 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 TCF7P36402 384 aaPredicted RBP23.79■■□□□ 1.4
USP6NL-204ENST00000606752 STAT5BP51692 787 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 KCNA1Q09470 495 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 ADAM9Q13443 819 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 ZC2HC1CQ53FD0 456 aaPredicted RBP23.79■■□□□ 1.4
USP6NL-204ENST00000606752 FAM102BQ5T8I3 360 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 HHIPL1Q96JK4 782 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 GPR20Q99678 358 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 NOC4LQ9BVI4 516 aaKnown RBP23.79■■□□□ 1.4
USP6NL-204ENST00000606752 PDLIM7Q9NR12 457 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 SLC5A4Q9NY91 659 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 TMEM88BA6NKF7 163 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 CETN3O15182 167 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 DNM2P50570 870 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 ALCAMQ13740 583 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 TAPT1Q6NXT6 567 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 C17orf99Q6UX52 265 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 MCPH1Q8NEM0 835 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 MAML3Q96JK9 1138 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 GPRC5CQ9NQ84 441 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.78■■□□□ 1.4
USP6NL-204ENST00000606752 PLXNB2O15031 1838 aa23.78■■□□□ 1.4
USP6NL-204ENST00000606752 PES1O00541 588 aaKnown RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 NOP56O00567 594 aaKnown RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 PPP1R37O75864 691 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 HSDL1Q3SXM5 330 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 KIFAP3Q92845 792 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 SPATA33Q96N06 139 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 NIFKQ9BYG3 293 aaKnown RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 AZI2Q9H6S1 392 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 RRAGDQ9NQL2 400 aaPredicted RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 NRBP2Q9NSY0 501 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 A0A1W2PQC6 194 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 RBM47A0AV96 593 aaKnown RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 TGFB1I1O43294 461 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 SNAI1O95863 264 aaPredicted RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 NR2F2P24468 414 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 RPL13P26373 211 aaKnown RBP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 MIIPQ5JXC2 388 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 SLC17A8Q8NDX2 589 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 ST6GALNAC4Q9H4F1 302 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 C17orf75Q9HAS0 396 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 ZFYVE28Q9HCC9 887 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 PYCARDQ9ULZ3 195 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.77■■□□□ 1.4
USP6NL-204ENST00000606752 WDR81Q562E7 1941 aa23.77■■□□□ 1.4
USP6NL-204ENST00000606752 K7ENM7 598 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 ZNF500O60304 480 aaPredicted RBP23.76■■□□□ 1.39
USP6NL-204ENST00000606752 MARSP56192 900 aaKnown RBP23.76■■□□□ 1.39
USP6NL-204ENST00000606752 MAN2A1Q16706 1144 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 MTERF2Q49AM1 385 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 PPFIBP1Q86W92 1011 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 KIAA1524Q8TCG1 905 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 COPS5Q92905 334 aa23.76■■□□□ 1.39
USP6NL-204ENST00000606752 MCM3APO60318 1980 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 LGR5O75473 907 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 SKILP12757 684 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 TM4SF4P48230 202 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 PEX3P56589 373 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 TBC1D8BQ0IIM8 1120 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 NFIL3Q16649 462 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 CCDC40Q4G0X9 1142 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 VWA3BQ502W6 1294 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 MORN1Q5T089 497 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 MSL3Q8N5Y2 521 aaKnown RBP23.75■■□□□ 1.39
USP6NL-204ENST00000606752 TINF2Q9BSI4 451 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 KATNBL1Q9H079 304 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 ATP6V0A4Q9HBG4 840 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 CCZ1BP86790 482 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 CCZ1P86791 482 aaPredicted RBP23.75■■□□□ 1.39
USP6NL-204ENST00000606752 KSR1Q8IVT5 923 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 NPLOC4Q8TAT6 608 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 NDST4Q9H3R1 872 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 XPNPEP1Q9NQW7 623 aa23.75■■□□□ 1.39
USP6NL-204ENST00000606752 ZMYM2Q9UBW7 1377 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 NKRFO15226 690 aaKnown RBP eCLIP23.74■■□□□ 1.39
USP6NL-204ENST00000606752 NRDCO43847 1150 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 NR3C1P04150 777 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 SMTNP53814 917 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 NCKAP1LP55160 1127 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 RTP1P59025 263 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 LAMC2Q13753 1193 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 FKBP15Q5T1M5 1219 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 TMEM63BQ5T3F8 832 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 HS2ST1Q7LGA3 356 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 PLPPR4Q7Z2D5 763 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 GLG1Q92896 1179 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 FAM167AQ96KS9 214 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 NTPCRQ9BSD7 190 aaKnown RBP23.74■■□□□ 1.39
USP6NL-204ENST00000606752 GBP3Q9H0R5 595 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 TMEM206Q9H813 350 aa23.74■■□□□ 1.39
USP6NL-204ENST00000606752 MYH9P35579 1960 aaKnown RBP23.74■■□□□ 1.39
USP6NL-204ENST00000606752 PLXNA1Q9UIW2 1896 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 TOMM70O94826 608 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 GTF2BQ00403 316 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 RBL2Q08999 1139 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 MAP2K5Q13163 448 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 DMP1Q13316 513 aaPredicted RBP23.73■■□□□ 1.39
USP6NL-204ENST00000606752 TRIM14Q14142 442 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms