RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
TUBE1-208ENST00000604743 NBR1Q14596 966 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 TARBP2Q15633 366 aaKnown RBP16.16■□□□□ 0.18
TUBE1-208ENST00000604743 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 ANO5Q75V66 913 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 TPH2Q8IWU9 490 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 WRAP73Q9P2S5 460 aaPredicted RBP16.16■□□□□ 0.18
TUBE1-208ENST00000604743 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
TUBE1-208ENST00000604743 NOC2LQ9Y3T9 749 aaKnown RBP16.16■□□□□ 0.18
TUBE1-208ENST00000604743 KDM3AQ9Y4C1 1321 aa16.16■□□□□ 0.18
TUBE1-208ENST00000604743 H3BQV1 296 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 RFXAPO00287 272 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 ENPP3O14638 875 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 RPS6KA5O75582 802 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 IGFBP4P22692 258 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 TTC3P53804 2025 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 NPEPPSP55786 919 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 NLRP11P59045 1033 aaKnown RBP16.15■□□□□ 0.18
TUBE1-208ENST00000604743 TAP1Q03518 808 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 TMEM40Q8WWA1 233 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 ARNTL2Q8WYA1 636 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 TOP1MTQ969P6 601 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 EIF2AK1Q9BQI3 630 aaKnown RBP16.15■□□□□ 0.18
TUBE1-208ENST00000604743 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
TUBE1-208ENST00000604743 MTUS1Q9ULD2 1270 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
TUBE1-208ENST00000604743 SQORQ9Y6N5 450 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 CHD7Q9P2D1 2997 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
TUBE1-208ENST00000604743 POTEMA6NI47 508 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 GPR32O75388 356 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 TECP42680 631 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 CRYBB1P53674 252 aaPredicted RBP16.14■□□□□ 0.17
TUBE1-208ENST00000604743 DRP2Q13474 957 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 LINC01465Q8N7H1 131 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 ZNF579Q8NAF0 562 aaKnown RBP16.14■□□□□ 0.17
TUBE1-208ENST00000604743 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 PPM1EQ8WY54 764 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 CYP26B1Q9NR63 512 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 ST3GAL5Q9UNP4 418 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 INSL6Q9Y581 213 aa16.14■□□□□ 0.17
TUBE1-208ENST00000604743 ZBTB39O15060 712 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 SLITRK3O94933 977 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 U2AF2P26368 475 aaKnown RBP eCLIP16.13■□□□□ 0.171e-7■■■■■ 32.1
TUBE1-208ENST00000604743 YWHABP31946 246 aaKnown RBP16.13■□□□□ 0.17
TUBE1-208ENST00000604743 DNM2P50570 870 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 OTUD6AQ7L8S5 288 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 RTN4RL1Q86UN2 441 aaPredicted RBP16.13■□□□□ 0.17
TUBE1-208ENST00000604743 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 MAFAQ8NHW3 353 aaPredicted RBP16.13■□□□□ 0.17
TUBE1-208ENST00000604743 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 FTHL17Q9BXU8 183 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 TMX1Q9H3N1 280 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 ERVK-5Q9HDB9 667 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 NLRC5Q86WI3 1866 aa16.13■□□□□ 0.17
TUBE1-208ENST00000604743 A0A087WWV3 80 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 LINC01553A4QN01 128 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 EPOPA6NHQ4 379 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 GPR182O15218 404 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 MAFO75444 373 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 GPC3P51654 580 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 HTRA4P83105 476 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 ADGRE1Q14246 886 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 ODR4Q5SWX8 454 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 LARP1BQ659C4 914 aaKnown RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 FAM228AQ86W67 206 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 ADAMTS10Q9H324 1103 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-208ENST00000604743 PCDHB6Q9Y5E3 794 aa16.12■□□□□ 0.17
TUBE1-208ENST00000604743 IGKV6-21A0A0C4DH24 114 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 MGEA5O60502 916 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 CSDE1O75534 798 aaKnown RBP16.11■□□□□ 0.17
TUBE1-208ENST00000604743 FGFR4P22455 802 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 ORC2Q13416 577 aaPredicted RBP16.11■□□□□ 0.17
TUBE1-208ENST00000604743 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
TUBE1-208ENST00000604743 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 SLC7A3Q8WY07 619 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
TUBE1-208ENST00000604743 HSD17B14Q9BPX1 270 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 JPH2Q9BR39 696 aaPredicted RBP16.11■□□□□ 0.17
TUBE1-208ENST00000604743 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
TUBE1-208ENST00000604743 A0A087WZ62 844 aa16.1■□□□□ 0.17
TUBE1-208ENST00000604743 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
TUBE1-208ENST00000604743 PTGDRQ13258 359 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms