RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 HTRA4P83105 476 aaPredicted RBP11.24□□□□□ -0.61
SPCS1-205ENST00000602728 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
SPCS1-205ENST00000602728 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 FAM160B1Q5W0V3 765 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 MTHFD1LQ6UB35 978 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 TSHZ1Q6ZSZ6 1077 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 PLPPR4Q7Z2D5 763 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 NECAB1Q8N987 351 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 TATDN2Q93075 761 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 ZNF274Q96GC6 653 aaPredicted RBP11.24□□□□□ -0.61
SPCS1-205ENST00000602728 YME1L1Q96TA2 773 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 RAD9AQ99638 391 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
SPCS1-205ENST00000602728 TMEM150BA6NC51 233 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 RRN3P2A6NIE6 340 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 SLC37A4O43826 429 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 ZNF862O60290 1169 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 C22orf31O95567 290 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 CIITAP33076 1130 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 CLCN3P51790 818 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 ERVK-21P61565 698 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 ST3GAL1Q11201 340 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 ZNF746Q6NUN9 644 aaPredicted RBP11.23□□□□□ -0.61
SPCS1-205ENST00000602728 MIS18BP1Q6P0N0 1132 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 RPAINQ86UA6 219 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 RSPH3Q86UC2 560 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 CKAP2LQ8IYA6 745 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 APBB2Q92870 758 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
SPCS1-205ENST00000602728 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 GABBR1Q9UBS5 961 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 TCEAL9Q9UHQ7 104 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 GINS2Q9Y248 185 aa11.23□□□□□ -0.61
SPCS1-205ENST00000602728 MGEA5O60502 916 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 PFKFB2O60825 505 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 VTNP04004 478 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 COL1A2P08123 1366 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 KLRC1P26715 233 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 GATMP50440 423 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 KCNQ1P51787 676 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 KRT76Q01546 638 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 PRKCEQ02156 737 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 MUC3AQ02505 3323 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 INF2Q27J81 1249 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 SLC5A5Q92911 643 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 TOP1MTQ969P6 601 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 ZNF668Q96K58 619 aaPredicted RBP11.22□□□□□ -0.61
SPCS1-205ENST00000602728 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
SPCS1-205ENST00000602728 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
SPCS1-205ENST00000602728 RC3H2Q9HBD1 1191 aaKnown RBP11.22□□□□□ -0.61
SPCS1-205ENST00000602728 STK36Q9NRP7 1315 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 PCDHA2Q9Y5H9 948 aa11.22□□□□□ -0.61
SPCS1-205ENST00000602728 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 SMIM35A0A1B0GVV1 85 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 WDR64B1ANS9 1081 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 M0QZ92 97 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 HBP1O60381 514 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 GAS7O60861 476 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 PSAPP07602 524 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 PAK2Q13177 524 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 ME3Q16798 604 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 PAN2Q504Q3 1202 aaKnown RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 EPC2Q52LR7 807 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 MCTP2Q6DN12 878 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 SMAP1Q8IYB5 467 aaPredicted RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 OSMRQ99650 979 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 SH2D3AQ9BRG2 576 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 TEKT3Q9BXF9 490 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 CELF4Q9BZC1 486 aaKnown RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
SPCS1-205ENST00000602728 MAFBQ9Y5Q3 323 aaPredicted RBP11.21□□□□□ -0.61
SPCS1-205ENST00000602728 JAK2O60674 1132 aa11.2□□□□□ -0.62
SPCS1-205ENST00000602728 OATP04181 439 aa11.2□□□□□ -0.62
SPCS1-205ENST00000602728 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
SPCS1-205ENST00000602728 CTNNB1P35222 781 aa11.2□□□□□ -0.62
SPCS1-205ENST00000602728 SLC26A2P50443 739 aa11.2□□□□□ -0.62
SPCS1-205ENST00000602728 ANAPC15P60006 121 aa11.2□□□□□ -0.62
SPCS1-205ENST00000602728 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms