RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 C2orf69Q8N8R5 385 aa4.06□□□□□ -1.76
SGMS1-207ENST00000602619 YIPF4Q9BSR8 244 aa4.06□□□□□ -1.76
SGMS1-207ENST00000602619 DLL4Q9NR61 685 aa4.06□□□□□ -1.76
SGMS1-207ENST00000602619 ZFR2Q9UPR6 939 aaKnown RBP4.06□□□□□ -1.76
SGMS1-207ENST00000602619 ZDHHC9Q9Y397 364 aa4.06□□□□□ -1.76
SGMS1-207ENST00000602619 A0A087X1B8 175 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 PTPDC1A2A3K4 754 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 FOXS1O43638 330 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 KPNA6O60684 536 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 COL6A1P12109 1028 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 MYCLP1P12525 358 aaPredicted RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 ATP2A2P16615 1042 aaKnown RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 POU3F3P20264 500 aaPredicted RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 PHC1P78364 1004 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 DGCR2P98153 550 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 GRIN1Q05586 938 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 PCBP1Q15365 356 aaKnown RBP eCLIP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 STILQ15468 1287 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 USP39Q53GS9 565 aaKnown RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 GPR158Q5T848 1215 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 VASNQ6EMK4 673 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 RTN4RL1Q86UN2 441 aaPredicted RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 EFHBQ8N7U6 833 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 EXTL1Q92935 676 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 NAF1Q96HR8 494 aaKnown RBP4.05□□□□□ -1.76
SGMS1-207ENST00000602619 C16orf92Q96LL3 132 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 ZSWIM3Q96MP5 696 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 GNRHR2Q96P88 292 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 CSRNP2Q9H175 543 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 CAAP1Q9H8G2 361 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 ACSS2Q9NR19 701 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 KCND1Q9NSA2 647 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 ASB1Q9Y576 335 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 SPO11Q9Y5K1 396 aa4.05□□□□□ -1.76
SGMS1-207ENST00000602619 KCNK3O14649 394 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 HIP1RO75146 1068 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 EYA4O95677 639 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 ENO2P09104 434 aaPredicted RBP4.04□□□□□ -1.76
SGMS1-207ENST00000602619 MCM7P33993 719 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 SOX5P35711 763 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 LSSP48449 732 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 NFATC3Q12968 1075 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 EPHA7Q15375 998 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 TCTN3Q6NUS6 607 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 CNNM4Q6P4Q7 775 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 KLHL36Q8N4N3 616 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 ASB15Q8WXK1 588 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 ZCCHC14Q8WYQ9 949 aaKnown RBP4.04□□□□□ -1.76
SGMS1-207ENST00000602619 PUS7Q96PZ0 661 aaKnown RBP4.04□□□□□ -1.76
SGMS1-207ENST00000602619 ADOQ96SZ5 270 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 RIC8BQ9NVN3 520 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 OXSMQ9NWU1 459 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 RBPJLQ9UBG7 517 aa4.04□□□□□ -1.76
SGMS1-207ENST00000602619 ZNF891A8MT65 544 aaPredicted RBP4.03□□□□□ -1.76
SGMS1-207ENST00000602619 GOLGA6L22H0YM25 854 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 H7C1D1 291 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 SCDO00767 359 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 FOXP2O15409 715 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 TGM5O43548 720 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 ZEB2O60315 1214 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 CYP7B1O75881 506 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 IL18BPO95998 194 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 CYP17A1P05093 508 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 MMEP08473 750 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 PTGS1P23219 599 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 ADCYAP1R1P41586 468 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 NEK4P51957 841 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 INHBCP55103 352 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 SMAD3P84022 425 aaKnown RBP4.03□□□□□ -1.76
SGMS1-207ENST00000602619 PFKPQ01813 784 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 PTH1RQ03431 593 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 LRRC32Q14392 662 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 SMAD2Q15796 467 aaKnown RBP4.03□□□□□ -1.76
SGMS1-207ENST00000602619 SKIDA1Q1XH10 827 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 LSM12Q3MHD2 195 aaKnown RBP4.03□□□□□ -1.76
SGMS1-207ENST00000602619 HS1BP3Q53T59 392 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 ZNF662Q6ZS27 426 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 KIAA1958Q8N8K9 716 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 OR2W6PQ8NHA6 318 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 CHAC2Q8WUX2 184 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 FOXRED1Q96CU9 486 aaPredicted RBP4.03□□□□□ -1.76
SGMS1-207ENST00000602619 SCYL1Q96KG9 808 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 FOXB1Q99853 325 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 BRINP2Q9C0B6 783 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 ZMAT4Q9H898 229 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 INCENPQ9NQS7 918 aa4.03□□□□□ -1.76
SGMS1-207ENST00000602619 GAS7O60861 476 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 KLHL18O94889 574 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 CNOT4O95628 575 aaKnown RBP4.02□□□□□ -1.77
SGMS1-207ENST00000602619 KNG1P01042 644 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 KIF11P52732 1056 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 OCRLQ01968 901 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 KANK2Q63ZY3 851 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 ESRP1Q6NXG1 681 aaKnown RBP4.02□□□□□ -1.77
SGMS1-207ENST00000602619 TMC5Q6UXY8 1006 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 EP400NLQ6ZTU2 488 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 CXXC5Q7LFL8 322 aaKnown RBP4.02□□□□□ -1.77
SGMS1-207ENST00000602619 NME9Q86XW9 330 aa4.02□□□□□ -1.77
SGMS1-207ENST00000602619 NEU4Q8WWR8 484 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms