RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 CTNNB1P35222 781 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 GPM6BQ13491 265 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 PTPROQ16827 1216 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 AAK1Q2M2I8 961 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 XKR3Q5GH77 459 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 LINC01465Q8N7H1 131 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 ST3GAL5Q9UNP4 418 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 RWDD3Q9Y3V2 267 aa29.31■■■□□ 2.28
PNKP-216ENST00000601816 VCANP13611 3396 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 JAK2O60674 1132 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 TFF2Q03403 129 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 TBC1D8BQ0IIM8 1120 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 NR5A1Q13285 461 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 ZNF710Q8N1W2 664 aa29.3■■■□□ 2.28
PNKP-216ENST00000601816 MRPL38Q96DV4 380 aaKnown RBP29.3■■■□□ 2.28
PNKP-216ENST00000601816 REV3LO60673 3130 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 NLRP11P59045 1033 aaKnown RBP29.29■■■□□ 2.28
PNKP-216ENST00000601816 PPP2R5CQ13362 524 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 TRIM29Q14134 588 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 TARBP2Q15633 366 aaKnown RBP29.29■■■□□ 2.28
PNKP-216ENST00000601816 MTERF2Q49AM1 385 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 EARS2Q5JPH6 523 aaKnown RBP29.29■■■□□ 2.28
PNKP-216ENST00000601816 FAM228AQ86W67 206 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 CRIPAKQ8N1N5 446 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 NIFKQ9BYG3 293 aaKnown RBP29.29■■■□□ 2.28
PNKP-216ENST00000601816 VAV3Q9UKW4 847 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 LRFN2Q9ULH4 789 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 RALGAPA2Q2PPJ7 1873 aa29.29■■■□□ 2.28
PNKP-216ENST00000601816 DENND3A2RUS2 1198 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 TBX3O15119 743 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 MARCH6O60337 910 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 MGEA5O60502 916 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 SARSP49591 514 aaKnown RBP29.28■■■□□ 2.28
PNKP-216ENST00000601816 CMTR2Q8IYT2 770 aaKnown RBP29.28■■■□□ 2.28
PNKP-216ENST00000601816 BANK1Q8NDB2 785 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 TNFRSF25Q93038 417 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 HLA-CQ95604 372 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 ADAM2Q99965 735 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 C1orf112Q9NSG2 853 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 LIMCH1Q9UPQ0 1083 aa29.28■■■□□ 2.28
PNKP-216ENST00000601816 NLRC5Q86WI3 1866 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 FAM205CA6NFA0 338 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 EML1O00423 815 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 STBD1O95210 358 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 RB1P06400 928 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 LINC00271P0C7V0 271 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 IBSPP21815 317 aaPredicted RBP29.27■■■□□ 2.28
PNKP-216ENST00000601816 BMPR1AP36894 532 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 FOSBP53539 338 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 PSMC5P62195 406 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 ST3GAL1Q11201 340 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 POTEDQ86YR6 584 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 CLP1Q92989 425 aaKnown RBP29.27■■■□□ 2.28
PNKP-216ENST00000601816 ADAMTS10Q9H324 1103 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 RGS18Q9NS28 235 aa29.27■■■□□ 2.28
PNKP-216ENST00000601816 TMEM150BA6NC51 233 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 DDX11L8A8MPP1 907 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 C5orf67F2Z3F1 127 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 MMP1P03956 469 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 C8orf34Q49A92 452 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 TIGD5Q53EQ6 642 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 ADAMTS19Q8TE59 1207 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 SCLT1Q96NL6 688 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 C11orf84Q9BUA3 381 aaPredicted RBP29.26■■■□□ 2.27
PNKP-216ENST00000601816 RNF216Q9NWF9 866 aaPredicted RBP29.26■■■□□ 2.27
PNKP-216ENST00000601816 PCDHB7Q9Y5E2 793 aa29.26■■■□□ 2.27
PNKP-216ENST00000601816 PAN2Q504Q3 1202 aaKnown RBP29.25■■■□□ 2.27
PNKP-216ENST00000601816 SLC24A5Q71RS6 500 aa29.25■■■□□ 2.27
PNKP-216ENST00000601816 DIS3L2Q8IYB7 885 aaKnown RBP29.25■■■□□ 2.27
PNKP-216ENST00000601816 HAS1Q92839 578 aa29.25■■■□□ 2.27
PNKP-216ENST00000601816 MRPL42Q9Y6G3 142 aaKnown RBP29.25■■■□□ 2.27
PNKP-216ENST00000601816 DKC1O60832 514 aaKnown RBP eCLIP29.24■■■□□ 2.27
PNKP-216ENST00000601816 BAG4O95429 457 aaKnown RBP29.24■■■□□ 2.27
PNKP-216ENST00000601816 QARSP47897 775 aaKnown RBP29.24■■■□□ 2.27
PNKP-216ENST00000601816 GPC3P51654 580 aa29.24■■■□□ 2.27
PNKP-216ENST00000601816 SLFN12Q8IYM2 578 aa29.24■■■□□ 2.27
PNKP-216ENST00000601816 ZNF668Q96K58 619 aaPredicted RBP29.24■■■□□ 2.27
PNKP-216ENST00000601816 BTBD18B2RXH4 712 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 C9IYK1 514 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 EIF4BP23588 611 aaKnown RBP29.23■■■□□ 2.27
PNKP-216ENST00000601816 KCNQ1P51787 676 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 CCDC83Q8IWF9 413 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 CEP89Q96ST8 783 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 SH2D3AQ9BRG2 576 aa29.23■■■□□ 2.27
PNKP-216ENST00000601816 P4HBP07237 508 aaKnown RBP29.22■■■□□ 2.27
PNKP-216ENST00000601816 GATMP50440 423 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 DNM2P50570 870 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 DRP2Q13474 957 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 ANO5Q75V66 913 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 NLRP7Q8WX94 980 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 PLVAPQ9BX97 442 aa29.22■■■□□ 2.27
PNKP-216ENST00000601816 IGKV6-21A0A0C4DH24 114 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 BMP1P13497 986 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 DARSP14868 501 aaKnown RBP29.21■■■□□ 2.27
PNKP-216ENST00000601816 DSC3Q14574 896 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 EPHA7Q15375 998 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 PLA2G4FQ68DD2 849 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 NCAPH2Q6IBW4 605 aa29.21■■■□□ 2.27
PNKP-216ENST00000601816 UHRF1Q96T88 793 aaPredicted RBP29.21■■■□□ 2.27
PNKP-216ENST00000601816 JPH2Q9BR39 696 aaPredicted RBP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms