RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 PPP1R13LQ8WUF5 828 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 PHKBQ93100 1093 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 MRPL38Q96DV4 380 aaKnown RBP9.67□□□□□ -0.86
DDX49-211ENST00000601772 TIGD1Q96MW7 591 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 INPP4AQ96PE3 977 aaPredicted RBP9.67□□□□□ -0.86
DDX49-211ENST00000601772 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
DDX49-211ENST00000601772 NCOA5Q9HCD5 579 aaKnown RBP9.67□□□□□ -0.86
DDX49-211ENST00000601772 RIC8AQ9NPQ8 531 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 BARHL2Q9NY43 387 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 PCDHA6Q9UN73 950 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 PCDHA8Q9Y5H6 950 aa9.67□□□□□ -0.86
DDX49-211ENST00000601772 PTPRSQ13332 1948 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 LINC01553A4QN01 128 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 SMCO2A6NFE2 343 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 GGPS1O95749 300 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 TGFB3P10600 412 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 SCG2P13521 617 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 IFNAR1P17181 557 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 UBA1P22314 1058 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 ICAM3P32942 547 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 ADCY7P51828 1080 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 SIGLEC14Q08ET2 396 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 STK3Q13188 491 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 SEMA3FQ13275 785 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 LAMC2Q13753 1193 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 PUM1Q14671 1186 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDX49-211ENST00000601772 PTPN14Q15678 1187 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 CAMK4Q16566 473 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 CEP135Q66GS9 1140 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 MCTP2Q6DN12 878 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 XRRA1Q6P2D8 792 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 CKAP2LQ8IYA6 745 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 KIAA2013Q8IYS2 634 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 ENGASEQ8NFI3 743 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 MRPS27Q92552 414 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 C17orf80Q9BSJ5 609 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 SRRTQ9BXP5 876 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 RNF26Q9BY78 433 aaPredicted RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 SEZ6LQ9BYH1 1024 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 BCAS3Q9H6U6 928 aa9.66□□□□□ -0.86
DDX49-211ENST00000601772 TRMT13Q9NUP7 481 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 MYH9P35579 1960 aaKnown RBP9.66□□□□□ -0.86
DDX49-211ENST00000601772 WDR87Q6ZQQ6 2873 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 LOXHD1Q8IVV2 1947 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 SPATA31C2B4DYI2 1134 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 IKBKBO14920 756 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 CBFA2T2O43439 604 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 MBTPS2O43462 519 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 TPM1P09493 284 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 CHMP4BP1P59074 171 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 WDR5P61964 334 aaKnown RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 DEFB103AP81534 67 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 AKAP17AQ02040 695 aaKnown RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 SCRN1Q12765 414 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 DGKDQ16760 1214 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 HSDL1Q3SXM5 330 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 NLRX1Q86UT6 975 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 ZNF397Q8NF99 534 aaPredicted RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 KAT2BQ92831 832 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 SPATA33Q96N06 139 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 ANO3Q9BYT9 981 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 DNAJC25Q9H1X3 360 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 EHMT1Q9H9B1 1298 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 MLXIPQ9HAP2 919 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 TMEM260Q9NX78 707 aa9.65□□□□□ -0.86
DDX49-211ENST00000601772 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
DDX49-211ENST00000601772 BAIAP3O94812 1187 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 ZNF286BP0CG31 522 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 HOXD8P13378 290 aaPredicted RBP9.64□□□□□ -0.87
DDX49-211ENST00000601772 ITGB5P18084 799 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 RFC2P35250 354 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 AP3B2Q13367 1082 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 NEDD9Q14511 834 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
DDX49-211ENST00000601772 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 TEX2Q8IWB9 1127 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 CCDC12Q8WUD4 166 aaPredicted RBP9.64□□□□□ -0.87
DDX49-211ENST00000601772 CACTINQ8WUQ7 758 aaKnown RBP9.64□□□□□ -0.87
DDX49-211ENST00000601772 GPRASP2Q96D09 838 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 ASIC4Q96FT7 647 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 RAD9AQ99638 391 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 GLT8D2Q9H1C3 349 aa9.64□□□□□ -0.87
DDX49-211ENST00000601772 NSUN3Q9H649 340 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms