RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 SRP68Q9UHB9 627 aaKnown RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 COA3Q9Y2R0 106 aaPredicted RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 USP42Q9H9J4 1324 aaKnown RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 INSRP06213 1382 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 SMG6Q86US8 1419 aaKnown RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 DLEC1Q9Y238 1755 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 TCRBV16S1A1N1A0A5B0 115 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 FAM47E-STBD1D6RA91 191 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 IRS4O14654 1257 aaPredicted RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 WNT9AO14904 365 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 ASLP04424 464 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 SDSP20132 328 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 MAP2K1Q02750 393 aaPredicted RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 MROH9Q5TGP6 573 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 WWC2Q6AWC2 1192 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 ZC3H7AQ8IWR0 971 aaKnown RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 DHX37Q8IY37 1157 aaKnown RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 NETO2Q8NC67 525 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 PCDH19Q8TAB3 1148 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 RAPGEF4Q8WZA2 1011 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 FAM168AQ92567 244 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 MCOLN1Q9GZU1 580 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 EPB41L1Q9H4G0 881 aa5.94□□□□□ -1.46
VRK3-222ENST00000601324 TAF1DQ9H5J8 278 aaPredicted RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
VRK3-222ENST00000601324 TONSLQ96HA7 1378 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 B4E1Z4 1266 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 DDNO94850 711 aaPredicted RBP5.93□□□□□ -1.46
VRK3-222ENST00000601324 CYBBP04839 570 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 DBHP09172 617 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 IGFALSP35858 605 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 RRS1Q15050 365 aaKnown RBP5.93□□□□□ -1.46
VRK3-222ENST00000601324 HSP90AB2PQ58FF8 381 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 ADGRF1Q5T601 910 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 LDHDQ86WU2 507 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 IRF2BP1Q8IU81 584 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
VRK3-222ENST00000601324 TMX1Q9H3N1 280 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 IPPKQ9H8X2 491 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.93□□□□□ -1.46
VRK3-222ENST00000601324 PRKAB1Q9Y478 270 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 TNPO3Q9Y5L0 923 aaKnown RBP5.93□□□□□ -1.46
VRK3-222ENST00000601324 CARMIL3Q8ND23 1372 aa5.93□□□□□ -1.46
VRK3-222ENST00000601324 DICER1Q9UPY3 1922 aaKnown RBP5.92□□□□□ -1.46
VRK3-222ENST00000601324 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.92□□□□□ -1.46
VRK3-222ENST00000601324 OPA1O60313 960 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 DGKIO75912 1065 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 NTRK1P04629 796 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 MPOP05164 745 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 PHKG2P15735 406 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 RFC4P35249 363 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 SLC6A11P48066 632 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 AMPHP49418 695 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 NR1I3Q14994 352 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 DEFB115Q30KQ5 88 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 PAQR3Q6TCH7 311 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 ZNF662Q6ZS27 426 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 DCP2Q8IU60 420 aaKnown RBP5.92□□□□□ -1.46
VRK3-222ENST00000601324 FBXW5Q969U6 566 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 JAM3Q9BX67 310 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 FER1L6Q2WGJ9 1857 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 CCDC88AQ3V6T2 1871 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 KIF24Q5T7B8 1368 aa5.92□□□□□ -1.46
VRK3-222ENST00000601324 OR14I1A6ND48 311 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 GSTA4O15217 222 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 CKMP06732 381 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 GNAT1P11488 350 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 SDHBP21912 280 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 PDE6BP35913 854 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 FLT3P36888 993 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 ZNF460Q14592 562 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 NFIXQ14938 502 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 FAM47CQ5HY64 1035 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 ZCCHC8Q6NZY4 707 aaKnown RBP5.91□□□□□ -1.46
VRK3-222ENST00000601324 C16orf59Q7L2K0 433 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 LRRTM3Q86VH5 581 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 TTLL6Q8N841 843 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 PANK1Q8TE04 598 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 PEX11GQ96HA9 241 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 KCNJ15Q99712 375 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 CELF4Q9BZC1 486 aaKnown RBP5.91□□□□□ -1.46
VRK3-222ENST00000601324 TMOD3Q9NYL9 352 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 NUDT5Q9UKK9 219 aa5.91□□□□□ -1.46
VRK3-222ENST00000601324 AFDNP55196 1824 aaKnown RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 A0A087X0B3 334 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 ZNF503-AS2A6NEH8 195 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 NUDT19A8MXV4 375 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 ABLIM1O14639 778 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 FYB1O15117 783 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 NPTXRO95502 500 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 PYGMP11217 842 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 MYCLP1P12525 358 aaPredicted RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 POU3F2P20265 443 aaPredicted RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 CRKLP46109 303 aaKnown RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 MASP1P48740 699 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 SPIRE1Q08AE8 756 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 TMEM62Q0P6H9 643 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms