RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 AMHP03971 560 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 DNM2P50570 870 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.616e-12■■■□□ 18.7
TRIM28-215ENST00000601150 RABGGTBP53611 331 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 CRYBB1P53674 252 aaPredicted RBP18.85■□□□□ 0.61
TRIM28-215ENST00000601150 NPEPPSP55786 919 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 DEFB103AP81534 67 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 Q7L0L9 218 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 EXOC8Q8IYI6 725 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 ERMNQ8TAM6 284 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 AGO3Q9H9G7 860 aaKnown RBP18.85■□□□□ 0.61
TRIM28-215ENST00000601150 TUFT1Q9NNX1 390 aa18.85■□□□□ 0.61
TRIM28-215ENST00000601150 IGKV6-21A0A0C4DH24 114 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 GPR32O75388 356 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 MAFO75444 373 aaPredicted RBP18.84■□□□□ 0.61
TRIM28-215ENST00000601150 SYT1P21579 422 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 CD52P31358 61 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 RFC5P40937 340 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 PRPHP41219 470 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 PAK2Q13177 524 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 KIZQ2M2Z5 673 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.84■□□□□ 0.615e-10■□□□□ 10.1
TRIM28-215ENST00000601150 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 CDHR5Q9HBB8 845 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 ANKEF1Q9NU02 776 aa18.84■□□□□ 0.61
TRIM28-215ENST00000601150 LAMA2P24043 3122 aaKnown RBP18.84■□□□□ 0.61
TRIM28-215ENST00000601150 ZBTB39O15060 712 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 POLGP54098 1239 aaPredicted RBP18.83■□□□□ 0.6
TRIM28-215ENST00000601150 NLRP11P59045 1033 aaKnown RBP18.83■□□□□ 0.6
TRIM28-215ENST00000601150 XKR9Q5GH70 373 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 ODR4Q5SWX8 454 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
TRIM28-215ENST00000601150 OSMRQ99650 979 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 POLR3CQ9BUI4 534 aaPredicted RBP18.83■□□□□ 0.6
TRIM28-215ENST00000601150 RAB34Q9BZG1 259 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 NKX2-4Q9H2Z4 354 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 PADI3Q9ULW8 664 aa18.83■□□□□ 0.6
TRIM28-215ENST00000601150 YBX2Q9Y2T7 364 aaKnown RBP18.83■□□□□ 0.6
TRIM28-215ENST00000601150 MED24O75448 989 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 RPS6KA5O75582 802 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 SLC34A2O95436 690 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 SPATA31C1P0DKV0 1188 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 XRCC6P12956 609 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 RPA1P27694 616 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 ATP2C1P98194 919 aaPredicted RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 CDC42EP1Q00587 391 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 DRP2Q13474 957 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 PDIA5Q14554 519 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 HAUS3Q68CZ6 603 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 DTHD1Q6ZMT9 781 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 FAM43BQ6ZT52 329 aaPredicted RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 TMCO2Q7Z6W1 182 aaPredicted RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 CATSPER3Q86XQ3 398 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 MYOCDQ8IZQ8 938 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 CCDC43Q96MW1 224 aaKnown RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 ZBED2Q9BTP6 218 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 TTYH1Q9H313 450 aaPredicted RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 ADAMTS10Q9H324 1103 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 SEMA6BQ9H3T3 888 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 DHX33Q9H6R0 707 aaKnown RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 MTMR10Q9NXD2 777 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 SUCLA2Q9P2R7 463 aaPredicted RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 LRWD1Q9UFC0 647 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 NOC2LQ9Y3T9 749 aaKnown RBP18.82■□□□□ 0.6
TRIM28-215ENST00000601150 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
TRIM28-215ENST00000601150 MYH15Q9Y2K3 1946 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.81■□□□□ 0.6
TRIM28-215ENST00000601150 TLL1O43897 1013 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 GAS2O43903 313 aaKnown RBP18.81■□□□□ 0.6
TRIM28-215ENST00000601150 GJB5O95377 273 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 MYOGP15173 224 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 GPC3P51654 580 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 IGSF22Q8N9C0 903 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 FAM161BQ96MY7 647 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 SCLT1Q96NL6 688 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 ZNF576Q9H609 170 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 ERVK-5Q9HDB9 667 aa18.81■□□□□ 0.6
TRIM28-215ENST00000601150 ENPP3O14638 875 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 GPR182O15218 404 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 MUTP22033 750 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 CCT6AP40227 531 aaKnown RBP18.8■□□□□ 0.6
TRIM28-215ENST00000601150 NFX1Q12986 1120 aaKnown RBP18.8■□□□□ 0.6
TRIM28-215ENST00000601150 IL17AQ16552 155 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 PIGOQ8TEQ8 1089 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 NACC1Q96RE7 527 aa18.8■□□□□ 0.6
TRIM28-215ENST00000601150 TTC3P53804 2025 aa18.79■□□□□ 0.6
TRIM28-215ENST00000601150 STX6O43752 255 aa18.79■□□□□ 0.6
TRIM28-215ENST00000601150 BMP15O95972 392 aa18.79■□□□□ 0.6
TRIM28-215ENST00000601150 EIF4BP23588 611 aaKnown RBP18.79■□□□□ 0.6
TRIM28-215ENST00000601150 RARRES1P49788 294 aa18.79■□□□□ 0.6
TRIM28-215ENST00000601150 RESTQ13127 1097 aa18.79■□□□□ 0.6
TRIM28-215ENST00000601150 EMC2Q15006 297 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms