RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
LSM4-206ENST00000600289 TTC12Q9H892 705 aaPredicted RBP18.16■□□□□ 0.5
LSM4-206ENST00000600289 PPME1Q9Y570 386 aa18.16■□□□□ 0.5
LSM4-206ENST00000600289 TRPV2Q9Y5S1 764 aa18.16■□□□□ 0.5
LSM4-206ENST00000600289 CDY2AQ9Y6F7 541 aa18.16■□□□□ 0.5
LSM4-206ENST00000600289 USP34Q70CQ2 3546 aa18.16■□□□□ 0.5
LSM4-206ENST00000600289 TLL1O43897 1013 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 ATP2A2P16615 1042 aaKnown RBP18.15■□□□□ 0.5
LSM4-206ENST00000600289 RAB30Q15771 203 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 FBXO47Q5MNV8 452 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 C4orf19Q8IY42 314 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 KIAA0319LQ8IZA0 1049 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 DBF4BQ8NFT6 615 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 SEPT8Q92599 483 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 FAM49AQ9H0Q0 323 aaPredicted RBP18.15■□□□□ 0.5
LSM4-206ENST00000600289 TMEM60Q9H2L4 133 aa18.15■□□□□ 0.5
LSM4-206ENST00000600289 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
LSM4-206ENST00000600289 M0QZ92 97 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 OR52Z1P0C646 297 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 MCM7P33993 719 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 KCNJ6P48051 423 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 LPIN1Q14693 890 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 TSHZ1Q6ZSZ6 1077 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 LXNQ9BS40 222 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
LSM4-206ENST00000600289 CELF4Q9BZC1 486 aaKnown RBP18.14■□□□□ 0.49
LSM4-206ENST00000600289 SEPT9Q9UHD8 586 aaPredicted RBP18.14■□□□□ 0.49
LSM4-206ENST00000600289 MSRAQ9UJ68 235 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 PCDHA11Q9Y5I1 949 aa18.14■□□□□ 0.49
LSM4-206ENST00000600289 IGKV6-21A0A0C4DH24 114 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 H3BQV1 296 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 LYPLA2O95372 231 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 TXKP42681 527 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 TOB1P50616 345 aaPredicted RBP18.13■□□□□ 0.49
LSM4-206ENST00000600289 RILPL1Q5EBL4 403 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 LARP1BQ659C4 914 aaKnown RBP18.13■□□□□ 0.49
LSM4-206ENST00000600289 ANO5Q75V66 913 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 C4orf32Q8N8J7 132 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 OSBPL7Q9BZF2 842 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 WRAP73Q9P2S5 460 aaPredicted RBP18.13■□□□□ 0.49
LSM4-206ENST00000600289 RALGAPA2Q2PPJ7 1873 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 CACNA1AO00555 2505 aa18.13■□□□□ 0.49
LSM4-206ENST00000600289 COL4A4P53420 1690 aaPredicted RBP18.12■□□□□ 0.49
LSM4-206ENST00000600289 PI4K2BG5E9Z4 385 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 LAD1O00515 517 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 ATP2B1P20020 1258 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 PDCP20941 246 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 TMOD1P28289 359 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 NHLH1Q02575 133 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 ZNF174Q15697 407 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 HERC6Q8IVU3 1022 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 DYDC2Q96IM9 177 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 EIF2AK1Q9BQI3 630 aaKnown RBP18.12■□□□□ 0.49
LSM4-206ENST00000600289 SLC28A3Q9HAS3 691 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 BRWD1Q9NSI6 2320 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
LSM4-206ENST00000600289 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
LSM4-206ENST00000600289 SLITRK3O94933 977 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 GHRP10912 638 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 FXR2P51116 673 aaKnown RBP eCLIP18.11■□□□□ 0.496e-8■□□□□ 9.9
LSM4-206ENST00000600289 MTERF2Q49AM1 385 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 EFCAB12Q6NXP0 572 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 EXOC8Q8IYI6 725 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 MAP7D2Q96T17 732 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
LSM4-206ENST00000600289 CD320Q9NPF0 282 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 CYP26B1Q9NR63 512 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.11■□□□□ 0.49
LSM4-206ENST00000600289 RGL1Q9NZL6 768 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 TTC3P53804 2025 aa18.11■□□□□ 0.49
LSM4-206ENST00000600289 ZNF318Q5VUA4 2279 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 POTEMA6NI47 508 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 PRR33A8MZF0 331 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 AMHP03971 560 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 YWHABP31946 246 aaKnown RBP18.1■□□□□ 0.49
LSM4-206ENST00000600289 PRPHP41219 470 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 CLCN3P51790 818 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 CRYBB1P53674 252 aaPredicted RBP18.1■□□□□ 0.49
LSM4-206ENST00000600289 DEFB103AP81534 67 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 TMEM62Q0P6H9 643 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 MCTP1Q6DN14 999 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 OTUD6AQ7L8S5 288 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 TRMT1LQ7Z2T5 733 aaKnown RBP18.1■□□□□ 0.49
LSM4-206ENST00000600289 METTL13Q8N6R0 699 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
LSM4-206ENST00000600289 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 CFAP54Q96N23 3096 aa18.1■□□□□ 0.49
LSM4-206ENST00000600289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 TMEM150BA6NC51 233 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 GAS2O43903 313 aaKnown RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 GPR32O75388 356 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 GJB5O95377 273 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 MUTP22033 750 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms