RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 METTL13Q8N6R0 699 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 USP38Q8NB14 1042 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 CLIC6Q96NY7 704 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 CUEDC2Q9H467 287 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 ATP6V0A4Q9HBG4 840 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 MYH9P35579 1960 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-219ENST00000599575 RSPH10B2B2RC85 870 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 RSPH10BP0C881 870 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 CMA1P23946 247 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 MXD4Q14582 209 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 ECM1Q16610 540 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 RUFY4Q6ZNE9 571 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 RPUSD2Q8IZ73 545 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 SYT2Q8N9I0 419 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 DNAJB3Q8WWF6 145 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 PNMA5Q96PV4 448 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 MTRQ99707 1265 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 KCNG1Q9UIX4 513 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 TNRC18O15417 2968 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
SHKBP1-219ENST00000599575 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 TMEM150BA6NC51 233 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 ZBTB39O15060 712 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 CYP11B2P19099 503 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 MRPS6P82932 125 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 EMC2Q15006 297 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 RRAGBQ5VZM2 374 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 RESP18Q5W5W9 173 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 PADI6Q6TGC4 694 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 PSPC1Q8WXF1 523 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 PPP1R12CQ9BZL4 782 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
SHKBP1-219ENST00000599575 PLCG1P19174 1290 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 CYP2C18P33260 490 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 FPGSQ05932 587 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 POU5F1BQ06416 359 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 KARSQ15046 597 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 ZRSR1Q15695 479 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 ODR4Q5SWX8 454 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 SHC4Q6S5L8 630 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 ZNF410Q86VK4 478 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 IQUBQ8NA54 791 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 WNT8BQ93098 351 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 CELF4Q9BZC1 486 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 FAM49AQ9H0Q0 323 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 MAGEF1Q9HAY2 307 aa18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 ZMYND8Q9ULU4 1186 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-219ENST00000599575 E9PMD0 336 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 H0YGN5 161 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 CXCL10P02778 98 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 PLA2G4BP0C869 781 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 GUCY2CP25092 1073 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 CRYBB1P53674 252 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 SPECC1Q5M775 1068 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 TRAF7Q6Q0C0 670 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 USP49Q70CQ1 688 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 LARP4BQ92615 738 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 RAD54LQ92698 747 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 KIFAP3Q92845 792 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 INO80BQ9C086 356 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 LRRC27Q9C0I9 530 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 C17orf75Q9HAS0 396 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 SUCLA2Q9P2R7 463 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 USP25Q9UHP3 1055 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 AKT3Q9Y243 479 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 TRPV2Q9Y5S1 764 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 ALPK3Q96L96 1907 aa18.4■□□□□ 0.54
SHKBP1-219ENST00000599575 FAM237AA0A1B0GTK4 181 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 GOLGA6L4A6NEF3 574 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 SYN1P17600 705 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 ITGB8P26012 769 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 BMP8BP34820 402 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 CLCN3P51790 818 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 SLC12A3P55017 1021 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 MGAT3Q09327 533 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 PCBP1Q15365 356 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 LRRC71Q8N4P6 559 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 BADQ92934 168 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 DRC1Q96MC2 740 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 SH2D3AQ9BRG2 576 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 IL23AQ9NPF7 189 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 XPNPEP1Q9NQW7 623 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
SHKBP1-219ENST00000599575 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-219ENST00000599575 CHRNA1P02708 482 aa18.38■□□□□ 0.53
SHKBP1-219ENST00000599575 SCP2P22307 547 aa18.38■□□□□ 0.53
SHKBP1-219ENST00000599575 ARL2P36404 184 aa18.38■□□□□ 0.53
SHKBP1-219ENST00000599575 STAT6P42226 847 aa18.38■□□□□ 0.53
SHKBP1-219ENST00000599575 CCL23P55773 120 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms