RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SLC16A3O15427 465 aaKnown RBP15.87■□□□□ 0.13
VRK3-217ENST00000599538 OAZ1P54368 228 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 RAPGEF1Q13905 1077 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 SPA17Q15506 151 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 SFMBT2Q5VUG0 894 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 FAM186BQ8IYM0 893 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 FAM133AQ8N9E0 248 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 INPP4AQ96PE3 977 aaPredicted RBP15.87■□□□□ 0.13
VRK3-217ENST00000599538 MLXIPQ9HAP2 919 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 DMAC2Q9NW81 257 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 SALL4Q9UJQ4 1053 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 MYH10P35580 1976 aa15.87■□□□□ 0.13
VRK3-217ENST00000599538 LCTP09848 1927 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 WDR81Q562E7 1941 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 K7ENM7 598 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SRGAP2O75044 1071 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 LYPLA2O95372 231 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 CCND2P30279 289 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SP4Q02446 784 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 EXOC3L4Q17RC7 722 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 GJB7Q6PEY0 223 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 ANKRD13CQ8N6S4 541 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 RDH13Q8NBN7 331 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 CCDC94Q9BW85 323 aaPredicted RBP15.86■□□□□ 0.13
VRK3-217ENST00000599538 GBP3Q9H0R5 595 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SIX2Q9NPC8 291 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 PNMA2Q9UL42 364 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 CAPN6Q9Y6Q1 641 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 PTPRFP10586 1907 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 WDR64B1ANS9 1081 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 ATP2A1O14983 1001 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 ZNF862O60290 1169 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 UCHL3P15374 230 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 KCNA2P16389 499 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 CLCN6P51797 869 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 PSMC5P62195 406 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 KIF5AQ12840 1032 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
VRK3-217ENST00000599538 KLHDC7AQ5VTJ3 777 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 ANO5Q75V66 913 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SRGAP1Q7Z6B7 1085 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 C4orf19Q8IY42 314 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 NSUN6Q8TEA1 469 aaKnown RBP15.86■□□□□ 0.13
VRK3-217ENST00000599538 ACAD9Q9H845 621 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 METTL14Q9HCE5 456 aaKnown RBP15.86■□□□□ 0.13
VRK3-217ENST00000599538 MYO6Q9UM54 1294 aa15.86■□□□□ 0.13
VRK3-217ENST00000599538 SSU72P8A0A1W2PR75 194 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 PSMC2P35998 433 aaKnown RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 SOX10P56693 466 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 SH3D19Q5HYK7 790 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 ZSWIM2Q8NEG5 633 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 SERPING1P05155 500 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 TRIM49P0CI25 452 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 TRIM49CP0CI26 452 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 PNMA6AP0CW24 399 aaPredicted RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 JAK3P52333 1124 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 CHMP4BP1P59074 171 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 KRT76Q01546 638 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 NFIL3Q16649 462 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 SLC9C1Q4G0N8 1177 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 XKR9Q5GH70 373 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 NLRX1Q86UT6 975 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 SYN2Q92777 582 aaPredicted RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 GPRASP2Q96D09 838 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 PCIF1Q9H4Z3 704 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 PLCB1Q9NQ66 1216 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 HOXC10Q9NYD6 342 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 GCNT4Q9P109 453 aa15.85■□□□□ 0.13
VRK3-217ENST00000599538 LARSQ9P2J5 1176 aaKnown RBP15.85■□□□□ 0.13
VRK3-217ENST00000599538 OTOFQ9HC10 1997 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 A0A087X0T9 212 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 MOCS3O95396 460 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 FAM228BP0C875 321 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 PLS3P13797 630 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 MAGEA1P43355 309 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 CBWD6Q4V339 395 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 CBWD3Q5JTY5 395 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 CBWD5Q5RIA9 395 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 SECISBP2LQ93073 1101 aaKnown RBP15.84■□□□□ 0.13
VRK3-217ENST00000599538 CLMNQ96JQ2 1002 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
VRK3-217ENST00000599538 BTBD7Q9P203 1132 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 GABBR1Q9UBS5 961 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 UBE4BO95155 1302 aa15.84■□□□□ 0.13
VRK3-217ENST00000599538 SLC16A4O15374 487 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 STBD1O95210 358 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.134e-7■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms