RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 MTMR10Q9NXD2 777 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 MORC2Q9Y6X9 1032 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 POTEMA6NI47 508 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 ENPP3O14638 875 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 ZBTB39O15060 712 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 PDIA4P13667 645 aaKnown RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 PBX2P40425 430 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 RFC5P40937 340 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 TECP42680 631 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 TBC1D8BQ0IIM8 1120 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 CTTNQ14247 550 aaKnown RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 ARL6IP4Q66PJ3 421 aaKnown RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 RTN4RL1Q86UN2 441 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 TMEM40Q8WWA1 233 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 TOP1MTQ969P6 601 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 ERVK-5Q9HDB9 667 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 SEPT9Q9UHD8 586 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-209ENST00000598570 STK24Q9Y6E0 443 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 ARID2Q68CP9 1835 aa19.74■□□□□ 0.75
USHBP1-209ENST00000598570 COL4A6Q14031 1691 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 GAS2O43903 313 aaKnown RBP19.73■□□□□ 0.75
USHBP1-209ENST00000598570 GJB5O95377 273 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 GHRP10912 638 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 NPEPPSP55786 919 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 DEFB103AP81534 67 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 HTRA4P83105 476 aaPredicted RBP19.73■□□□□ 0.75
USHBP1-209ENST00000598570 MCTP1Q6DN14 999 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.73■□□□□ 0.75
USHBP1-209ENST00000598570 TPH2Q8IWU9 490 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 FTHL17Q9BXU8 183 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 TMX1Q9H3N1 280 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 DBR1Q9UK59 544 aaKnown RBP19.73■□□□□ 0.75
USHBP1-209ENST00000598570 PADI3Q9ULW8 664 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 MTMR6Q9Y217 621 aa19.73■□□□□ 0.75
USHBP1-209ENST00000598570 YBX2Q9Y2T7 364 aaKnown RBP19.73■□□□□ 0.75
USHBP1-209ENST00000598570 M0QZ92 97 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 MED24O75448 989 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 GPC3P51654 580 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 CLCN3P51790 818 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 RESTQ13127 1097 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 DRP2Q13474 957 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 MTERF2Q49AM1 385 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 PLA2G4FQ68DD2 849 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 KCTD17Q8N5Z5 321 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 METTL13Q8N6R0 699 aa19.72■□□□□ 0.75
USHBP1-209ENST00000598570 TSPYL2Q9H2G4 693 aaPredicted RBP19.72■□□□□ 0.75
USHBP1-209ENST00000598570 NOC2LQ9Y3T9 749 aaKnown RBP19.72■□□□□ 0.75
USHBP1-209ENST00000598570 ZBBXA8MT70 800 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 RBAK-RBAKDNI3L0D1 243 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 VTNP04004 478 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 EIF4BP23588 611 aaKnown RBP19.71■□□□□ 0.75
USHBP1-209ENST00000598570 CD52P31358 61 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 KCNJ6P48051 423 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 RARRES1P49788 294 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 FAM189BP81408 668 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 CYP4A11Q02928 519 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 POU5F1BQ06416 359 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 TMEM62Q0P6H9 643 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 DSC3Q14574 896 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 TRMT1LQ7Z2T5 733 aaKnown RBP19.71■□□□□ 0.75
USHBP1-209ENST00000598570 LRRC71Q8N4P6 559 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 DEFB123Q8N688 67 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 SP7Q8TDD2 431 aaPredicted RBP19.71■□□□□ 0.75
USHBP1-209ENST00000598570 LINC01599Q8WXQ3 324 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 TIFAQ96CG3 184 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 CEP170P1Q96L14 293 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 NACC1Q96RE7 527 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 MAP7D2Q96T17 732 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 RAD9AQ99638 391 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 XPNPEP1Q9NQW7 623 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 MSRAQ9UJ68 235 aa19.71■□□□□ 0.75
USHBP1-209ENST00000598570 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
USHBP1-209ENST00000598570 DNM2P50570 870 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 NLRP11P59045 1033 aaKnown RBP19.7■□□□□ 0.74
USHBP1-209ENST00000598570 KIZQ2M2Z5 673 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 ODR4Q5SWX8 454 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 HYIQ5T013 277 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 ZNF410Q86VK4 478 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 MMTAG2Q9BU76 263 aaKnown RBP19.7■□□□□ 0.74
USHBP1-209ENST00000598570 SUGCTQ9HAC7 445 aa19.7■□□□□ 0.74
USHBP1-209ENST00000598570 GPR182O15218 404 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 ASAP2O43150 1006 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 SLC26A4O43511 780 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 DGAT1O75907 488 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 BMP15O95972 392 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 AMHP03971 560 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 RABGGTBP53611 331 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 ECM1Q16610 540 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 DTHD1Q6ZMT9 781 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 FAM228AQ86W67 206 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 IFNLR1Q8IU57 520 aaPredicted RBP19.69■□□□□ 0.74
USHBP1-209ENST00000598570 ERMNQ8TAM6 284 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 SLC7A3Q8WY07 619 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 GUCD1Q96NT3 240 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 ZNF576Q9H609 170 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 RC3H2Q9HBD1 1191 aaKnown RBP19.69■□□□□ 0.74
USHBP1-209ENST00000598570 IFT122Q9HBG6 1241 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms