RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 VTNP04004 478 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 BMP1P13497 986 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 UGCGQ16739 394 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 XKR3Q5GH77 459 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 PIK3AP1Q6ZUJ8 805 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 LINC01465Q8N7H1 131 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 NIFKQ9BYG3 293 aaKnown RBP25.91■■□□□ 1.74
SSBP4-205ENST00000598159 C1orf112Q9NSG2 853 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 LRFN2Q9ULH4 789 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 AKT3Q9Y243 479 aa25.91■■□□□ 1.74
SSBP4-205ENST00000598159 SARSP49591 514 aaKnown RBP25.9■■□□□ 1.74
SSBP4-205ENST00000598159 CLCN3P51790 818 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 TARBP2Q15633 366 aaKnown RBP25.9■■□□□ 1.74
SSBP4-205ENST00000598159 CMTR2Q8IYT2 770 aaKnown RBP25.9■■□□□ 1.74
SSBP4-205ENST00000598159 OXER1Q8TDS5 423 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 OSMRQ99650 979 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 BRMS1Q9HCU9 246 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 RGS18Q9NS28 235 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 PCDHB7Q9Y5E2 793 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 REV3LO60673 3130 aa25.9■■□□□ 1.74
SSBP4-205ENST00000598159 DENND3A2RUS2 1198 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 TBX3O15119 743 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 SLC37A4O43826 429 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 CCNT1O60563 726 aaKnown RBP25.89■■□□□ 1.74
SSBP4-205ENST00000598159 DTNBO60941 627 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 LARGE1O95461 756 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 LINC00271P0C7V0 271 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 CTNNB1P35222 781 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 NLRP11P59045 1033 aaKnown RBP25.89■■□□□ 1.74
SSBP4-205ENST00000598159 TBC1D8BQ0IIM8 1120 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 SLC24A5Q71RS6 500 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 ADAMTS19Q8TE59 1207 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 PPP1R16BQ96T49 567 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 ADAM2Q99965 735 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 C11orf84Q9BUA3 381 aaPredicted RBP25.89■■□□□ 1.74
SSBP4-205ENST00000598159 KCNMB3Q9NPA1 279 aa25.89■■□□□ 1.74
SSBP4-205ENST00000598159 KRT2P35908 639 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 PSMC5P62195 406 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 CDC42EP1Q00587 391 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 PPP2R5CQ13362 524 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 LRRC71Q8N4P6 559 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 NSUN7Q8NE18 718 aaKnown RBP25.88■■□□□ 1.73
SSBP4-205ENST00000598159 PLVAPQ9BX97 442 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 ADAMTS10Q9H324 1103 aa25.88■■□□□ 1.73
SSBP4-205ENST00000598159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.87■■□□□ 1.73
SSBP4-205ENST00000598159 TNFRSF10AO00220 468 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 MARCH6O60337 910 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 MGEA5O60502 916 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 DKC1O60832 514 aaKnown RBP eCLIP25.87■■□□□ 1.73
SSBP4-205ENST00000598159 STBD1O95210 358 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 TIGD5Q53EQ6 642 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 FAM228AQ86W67 206 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 LMAN2LQ9H0V9 348 aa25.87■■□□□ 1.73
SSBP4-205ENST00000598159 TCF20Q9UGU0 1960 aaKnown RBP25.86■■□□□ 1.73
SSBP4-205ENST00000598159 DDX11L8A8MPP1 907 aa25.86■■□□□ 1.73
SSBP4-205ENST00000598159 BAG4O95429 457 aaKnown RBP25.86■■□□□ 1.73
SSBP4-205ENST00000598159 EIF4BP23588 611 aaKnown RBP25.86■■□□□ 1.73
SSBP4-205ENST00000598159 KCNQ1P51787 676 aa25.86■■□□□ 1.73
SSBP4-205ENST00000598159 NAALADL2Q58DX5 795 aa25.86■■□□□ 1.73
SSBP4-205ENST00000598159 BANK1Q8NDB2 785 aa25.86■■□□□ 1.73
SSBP4-205ENST00000598159 UHRF1Q96T88 793 aaPredicted RBP25.86■■□□□ 1.73
SSBP4-205ENST00000598159 SEPT9Q9UHD8 586 aaPredicted RBP25.86■■□□□ 1.73
SSBP4-205ENST00000598159 C9IYK1 514 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 EML1O00423 815 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 DNM2P50570 870 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 GPC3P51654 580 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 FAM189BP81408 668 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 TRIM29Q14134 588 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 MTERF2Q49AM1 385 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 EARS2Q5JPH6 523 aaKnown RBP25.85■■□□□ 1.73
SSBP4-205ENST00000598159 SLFN12Q8IYM2 578 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 P2RX5Q93086 422 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 CEP89Q96ST8 783 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 VAV3Q9UKW4 847 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 LIMCH1Q9UPQ0 1083 aa25.85■■□□□ 1.73
SSBP4-205ENST00000598159 IGKV6-21A0A0C4DH24 114 aa25.84■■□□□ 1.73
SSBP4-205ENST00000598159 P4HBP07237 508 aaKnown RBP25.84■■□□□ 1.73
SSBP4-205ENST00000598159 QARSP47897 775 aaKnown RBP25.84■■□□□ 1.73
SSBP4-205ENST00000598159 NR5A1Q13285 461 aa25.84■■□□□ 1.73
SSBP4-205ENST00000598159 DSC3Q14574 896 aa25.84■■□□□ 1.73
SSBP4-205ENST00000598159 HAS1Q92839 578 aa25.84■■□□□ 1.73
SSBP4-205ENST00000598159 TNFRSF25Q93038 417 aa25.84■■□□□ 1.73
SSBP4-205ENST00000598159 NSUN3Q9H649 340 aaKnown RBP25.84■■□□□ 1.73
SSBP4-205ENST00000598159 ELAC1Q9H777 363 aaKnown RBP25.84■■□□□ 1.73
SSBP4-205ENST00000598159 MRPL42Q9Y6G3 142 aaKnown RBP25.84■■□□□ 1.73
SSBP4-205ENST00000598159 MMP1P03956 469 aa25.83■■□□□ 1.73
SSBP4-205ENST00000598159 ZSCAN20P17040 1043 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-205ENST00000598159 EPHA7Q15375 998 aa25.83■■□□□ 1.73
SSBP4-205ENST00000598159 JPH2Q9BR39 696 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-205ENST00000598159 UBE2ZQ9H832 354 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-205ENST00000598159 GRM6O15303 877 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 JAK2O60674 1132 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 MAFO75444 373 aaPredicted RBP25.82■■□□□ 1.72
SSBP4-205ENST00000598159 DARSP14868 501 aaKnown RBP25.82■■□□□ 1.72
SSBP4-205ENST00000598159 PAN2Q504Q3 1202 aaKnown RBP25.82■■□□□ 1.72
SSBP4-205ENST00000598159 ANO5Q75V66 913 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 EXOC8Q8IYI6 725 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 SCLT1Q96NL6 688 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 ATP6V0A4Q9HBG4 840 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 TMEM161AQ9NX61 479 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms