RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF710Q8N1W2 664 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 HAS1Q92839 578 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 HLA-CQ95604 372 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 MAP7D2Q96T17 732 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 OSMRQ99650 979 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 ADAM2Q99965 735 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 ADAMTS10Q9H324 1103 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 AKT3Q9Y243 479 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 EYSQ5T1H1 3165 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 TBX3O15119 743 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 MARCH6O60337 910 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 LINC00271P0C7V0 271 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 BMP1P13497 986 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 PSMC5P62195 406 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 PTPROQ16827 1216 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 FAM228AQ86W67 206 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 ADAMTS19Q8TE59 1207 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 TNFRSF25Q93038 417 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 MRPL38Q96DV4 380 aaKnown RBP16.95■□□□□ 0.3
LIG1-215ENST00000597901 CEP89Q96ST8 783 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 BRMS1Q9HCU9 246 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 LRFN2Q9ULH4 789 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 ADGRA3Q8IWK6 1321 aa16.95■□□□□ 0.3
LIG1-215ENST00000597901 DENND3A2RUS2 1198 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 TMEM150BA6NC51 233 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 BTBD18B2RXH4 712 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 C5orf67F2Z3F1 127 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 EIF4BP23588 611 aaKnown RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 FAM189BP81408 668 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 MTERF2Q49AM1 385 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 SLC24A5Q71RS6 500 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 CLP1Q92989 425 aaKnown RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 ZNF668Q96K58 619 aaPredicted RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 UHRF1Q96T88 793 aaPredicted RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 SH2D3AQ9BRG2 576 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 C1orf112Q9NSG2 853 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 SEPT9Q9UHD8 586 aaPredicted RBP16.94■□□□□ 0.3
LIG1-215ENST00000597901 RWDD3Q9Y3V2 267 aa16.94■□□□□ 0.3
LIG1-215ENST00000597901 IGKV6-21A0A0C4DH24 114 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 C9IYK1 514 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 MMP1P03956 469 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 IBSPP21815 317 aaPredicted RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 CTNNB1P35222 781 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 QARSP47897 775 aaKnown RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 GPC3P51654 580 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 CDC42EP1Q00587 391 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 DRP2Q13474 957 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 TRIM29Q14134 588 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 DSC3Q14574 896 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 EPHA7Q15375 998 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 ANO5Q75V66 913 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 DIS3L2Q8IYB7 885 aaKnown RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 KIF2CQ99661 725 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 PRUNE2Q8WUY3 3088 aa16.93■□□□□ 0.3
LIG1-215ENST00000597901 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
LIG1-215ENST00000597901 MICAL3Q7RTP6 2002 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.92■□□□□ 0.3
LIG1-215ENST00000597901 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIG1-215ENST00000597901 MAFO75444 373 aaPredicted RBP16.92■□□□□ 0.3
LIG1-215ENST00000597901 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
LIG1-215ENST00000597901 GATMP50440 423 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 DNM2P50570 870 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 KCNQ1P51787 676 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 FOSBP53539 338 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 MRPL42Q9Y6G3 142 aaKnown RBP16.92■□□□□ 0.3
LIG1-215ENST00000597901 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
LIG1-215ENST00000597901 GRM6O15303 877 aa16.91■□□□□ 0.3
LIG1-215ENST00000597901 DARSP14868 501 aaKnown RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 ZSCAN20P17040 1043 aaPredicted RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 FAM102BQ5T8I3 360 aa16.91■□□□□ 0.3
LIG1-215ENST00000597901 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
LIG1-215ENST00000597901 ZSCAN31Q96LW9 406 aaPredicted RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 LLPHQ9BRT6 129 aaKnown RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 PLVAPQ9BX97 442 aa16.91■□□□□ 0.3
LIG1-215ENST00000597901 RGL1Q9NZL6 768 aa16.91■□□□□ 0.3
LIG1-215ENST00000597901 SUCLA2Q9P2R7 463 aaPredicted RBP16.91■□□□□ 0.3
LIG1-215ENST00000597901 NPEPPSP55786 919 aa16.9■□□□□ 0.3
LIG1-215ENST00000597901 PLA2G4FQ68DD2 849 aa16.9■□□□□ 0.3
LIG1-215ENST00000597901 NCAPH2Q6IBW4 605 aa16.9■□□□□ 0.3
LIG1-215ENST00000597901 C4orf19Q8IY42 314 aa16.9■□□□□ 0.3
LIG1-215ENST00000597901 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
LIG1-215ENST00000597901 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms