RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 BECN1Q14457 450 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 XKR9Q5GH70 373 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 EXOC8Q8IYI6 725 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 DBF4BQ8NFT6 615 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 SEPT8Q92599 483 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 SUGCTQ9HAC7 445 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 ABHD14A-ACY1A0A1B0GW23 586 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 EFCAB14O75071 495 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 GPR32O75388 356 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 VTNP04004 478 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 GHRP10912 638 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 PTPAQ15257 358 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 TSHZ1Q6ZSZ6 1077 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 SLC7A3Q8WY07 619 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 APBB2Q92870 758 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 NACC1Q96RE7 527 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 IFIH1Q9BYX4 1025 aaKnown RBP20.22■□□□□ 0.83
IRF3-216ENST00000597180 DBR1Q9UK59 544 aaKnown RBP20.22■□□□□ 0.83
IRF3-216ENST00000597180 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 CLIC4Q9Y696 253 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 LAMA3Q16787 3333 aa20.22■□□□□ 0.83
IRF3-216ENST00000597180 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 VWA3AA6NCI4 1184 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 RBAK-RBAKDNI3L0D1 243 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 GAS2O43903 313 aaKnown RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 ZSCAN22P10073 491 aaPredicted RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 CCT6AP40227 531 aaKnown RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 RARRES1P49788 294 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 DNM2P50570 870 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 POLGP54098 1239 aaPredicted RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 SMAD3P84022 425 aaKnown RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 DRP2Q13474 957 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 IKBKEQ14164 716 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 POTEGQ6S5H5 508 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 PIGOQ8TEQ8 1089 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 AGO3Q9H9G7 860 aaKnown RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 CDHR5Q9HBB8 845 aa20.21■□□□□ 0.83
IRF3-216ENST00000597180 MORC2Q9Y6X9 1032 aaPredicted RBP20.21■□□□□ 0.83
IRF3-216ENST00000597180 PP2D1A8MPX8 630 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 ZBBXA8MT70 800 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 GPC3P51654 580 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 CRYBB1P53674 252 aaPredicted RBP20.2■□□□□ 0.82
IRF3-216ENST00000597180 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
IRF3-216ENST00000597180 WDR5P61964 334 aaKnown RBP20.2■□□□□ 0.82
IRF3-216ENST00000597180 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 PKP1Q13835 747 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 EMC2Q15006 297 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 ECM1Q16610 540 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 KRT79Q5XKE5 535 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 SNX29Q8TEQ0 813 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 AK8Q96MA6 479 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 MMTAG2Q9BU76 263 aaKnown RBP20.2■□□□□ 0.82
IRF3-216ENST00000597180 ADAMTS10Q9H324 1103 aa20.2■□□□□ 0.82
IRF3-216ENST00000597180 TTC3P53804 2025 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 DGAT1O75907 488 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 F13A1P00488 732 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 FAM109BQ6ICB4 259 aaPredicted RBP20.19■□□□□ 0.82
IRF3-216ENST00000597180 PHOSPHO2Q8TCD6 241 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 TMEM40Q8WWA1 233 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 OSMRQ99650 979 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 XPNPEP1Q9NQW7 623 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 SUCLA2Q9P2R7 463 aaPredicted RBP20.19■□□□□ 0.82
IRF3-216ENST00000597180 GINS2Q9Y248 185 aa20.19■□□□□ 0.82
IRF3-216ENST00000597180 A0A087WWV3 80 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 ATP2A2P16615 1042 aaKnown RBP20.18■□□□□ 0.82
IRF3-216ENST00000597180 CDC25AP30304 524 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 CD52P31358 61 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 KCNJ6P48051 423 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 HYIQ5T013 277 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 GPR153Q6NV75 609 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 FAM43BQ6ZT52 329 aaPredicted RBP20.18■□□□□ 0.82
IRF3-216ENST00000597180 TCP11Q8WWU5 503 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 LRCH3Q96II8 777 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 CCDC43Q96MW1 224 aaKnown RBP20.18■□□□□ 0.82
IRF3-216ENST00000597180 PPP1R16BQ96T49 567 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 MTRQ99707 1265 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 PADI3Q9ULW8 664 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 KIAA1024Q9UPX6 916 aa20.18■□□□□ 0.82
IRF3-216ENST00000597180 SLC26A4O43511 780 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
IRF3-216ENST00000597180 NASPP49321 788 aaPredicted RBP20.17■□□□□ 0.82
IRF3-216ENST00000597180 PAK2Q13177 524 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 ZNF410Q86VK4 478 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 KCTD17Q8N5Z5 321 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 ZNF396Q96N95 335 aaPredicted RBP20.17■□□□□ 0.82
IRF3-216ENST00000597180 ATP6V0A4Q9HBG4 840 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 ERVK-5Q9HDB9 667 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 DDX19AQ9NUU7 478 aaKnown RBP20.17■□□□□ 0.82
IRF3-216ENST00000597180 NOC2LQ9Y3T9 749 aaKnown RBP20.17■□□□□ 0.82
IRF3-216ENST00000597180 TCHHQ07283 1943 aa20.17■□□□□ 0.82
IRF3-216ENST00000597180 LAMA2P24043 3122 aaKnown RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 GRXCR1A8MXD5 290 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 RPS6KA5O75582 802 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms