RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PKP1Q13835 747 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 PDIA5Q14554 519 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 SF3A1Q15459 793 aaKnown RBP16.75■□□□□ 0.27
SCN1B-204ENST00000596348 ECM1Q16610 540 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 KIZQ2M2Z5 673 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 TMEM40Q8WWA1 233 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 IFIH1Q9BYX4 1025 aaKnown RBP16.75■□□□□ 0.27
SCN1B-204ENST00000596348 MTIF3Q9H2K0 278 aaKnown RBP16.75■□□□□ 0.27
SCN1B-204ENST00000596348 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
SCN1B-204ENST00000596348 AKT3Q9Y243 479 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
SCN1B-204ENST00000596348 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 M0QZ92 97 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 CDC25AP30304 524 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 CD52P31358 61 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 DEFB103AP81534 67 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 SMAD3P84022 425 aaKnown RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 TSHZ1Q6ZSZ6 1077 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 OTUD6AQ7L8S5 288 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 ERMNQ8TAM6 284 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 SEPT8Q92599 483 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 ZNF668Q96K58 619 aaPredicted RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 MAP7D2Q96T17 732 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 MMTAG2Q9BU76 263 aaKnown RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 ADAMTS10Q9H324 1103 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
SCN1B-204ENST00000596348 ANKEF1Q9NU02 776 aa16.74■□□□□ 0.27
SCN1B-204ENST00000596348 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 VWA3AA6NCI4 1184 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 TMOD1P28289 359 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 PBX2P40425 430 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 RFC5P40937 340 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 RARRES1P49788 294 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 NLRP11P59045 1033 aaKnown RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 GRIN1Q05586 938 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 IKBKEQ14164 716 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 EMC2Q15006 297 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 PTPAQ15257 358 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 TMCO2Q7Z6W1 182 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 SNX29Q8TEQ0 813 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 OSMRQ99650 979 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 NOC2LQ9Y3T9 749 aaKnown RBP16.73■□□□□ 0.27
SCN1B-204ENST00000596348 PPME1Q9Y570 386 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
SCN1B-204ENST00000596348 BMP15O95972 392 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 GPC3P51654 580 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 CRYBB1P53674 252 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-204ENST00000596348 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-204ENST00000596348 HAUS3Q68CZ6 603 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCN1B-204ENST00000596348 SLC7A3Q8WY07 619 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 ZSCAN16Q9H4T2 348 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-204ENST00000596348 SUCLA2Q9P2R7 463 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-204ENST00000596348 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 TTC3P53804 2025 aa16.72■□□□□ 0.27
SCN1B-204ENST00000596348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-204ENST00000596348 EFCAB14O75071 495 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-204ENST00000596348 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCN1B-204ENST00000596348 KCNJ6P48051 423 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 RABGGTBP53611 331 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 KSR1Q8IVT5 923 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 USP38Q8NB14 1042 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 LINC01599Q8WXQ3 324 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 APBB2Q92870 758 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 NACC1Q96RE7 527 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 SLC9A7Q96T83 725 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-204ENST00000596348 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
SCN1B-204ENST00000596348 DBR1Q9UK59 544 aaKnown RBP16.71■□□□□ 0.27
SCN1B-204ENST00000596348 F13A1P00488 732 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 MYOGP15173 224 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 MUTP22033 750 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 DNAJB2P25686 324 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 DNM2P50570 870 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
SCN1B-204ENST00000596348 PAK2Q13177 524 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 FAM228AQ86W67 206 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 RHPN2Q8IUC4 686 aa16.7■□□□□ 0.26
SCN1B-204ENST00000596348 HERC6Q8IVU3 1022 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms