RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 GUF1Q8N442 669 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 AOPEPQ8N6M6 819 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 RAET1EQ8TD07 263 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 FGFBP2Q9BYJ0 223 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 PARVGQ9HBI0 331 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 ERAP1Q9NZ08 941 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 SEL1LQ9UBV2 794 aa16.33■□□□□ 0.2
SHKBP1-211ENST00000595945 HBP1O60381 514 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF286BP0CG31 522 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 GJA9P57773 515 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 MYL5Q02045 173 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 GLIS3Q8NEA6 775 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 DHTKD1Q96HY7 919 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 AP5M1Q9H0R1 490 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
SHKBP1-211ENST00000595945 COL1A2P08123 1366 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 IGKV6-21A0A0C4DH24 114 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 MAFO75444 373 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 PLS3P13797 630 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 MARK3P27448 753 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 CPT1AP50416 773 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 RTP1P59025 263 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 IRX5P78411 483 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 PAK1Q13153 545 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 STIM1Q13586 685 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 EMC2Q15006 297 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 BMT2Q1RMZ1 405 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 NELFBQ8WX92 580 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 KAT2BQ92831 832 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 DRC1Q96MC2 740 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 STRA6Q9BX79 667 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 HSD3B7Q9H2F3 369 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 RNPEPQ9H4A4 650 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 TBC1D7Q9P0N9 293 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF215Q9UL58 517 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
SHKBP1-211ENST00000595945 SYNRGQ9UMZ2 1314 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 H3BRB1 525 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 HAS3O00219 553 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 PSMA7O14818 248 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 F2P00734 622 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 CCNE1P24864 410 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 CASP5P51878 434 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 LRRC41Q15345 812 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 FSCN1Q16658 493 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 FAM102BQ5T8I3 360 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 KLHL10Q6JEL2 608 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 FOXR2Q6PJQ5 311 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 TUT1Q9H6E5 874 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 TRIM17Q9Y577 477 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
SHKBP1-211ENST00000595945 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 BECN2A8MW95 431 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 ADAMTS4O75173 837 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 PPP1R37O75864 691 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 MYBP10242 640 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 ARL2P36404 184 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 POLGP54098 1239 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 NCKAP1LP55160 1127 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 BEX3Q00994 111 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 BRDTQ58F21 947 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 ODR4Q5SWX8 454 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 EXOC8Q8IYI6 725 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 MYOCDQ8IZQ8 938 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 BSNDQ8WZ55 320 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 KCNN1Q92952 543 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 P2RX5Q93086 422 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 SEMA6BQ9H3T3 888 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 C17orf75Q9HAS0 396 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms