RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 UPP2O95045 317 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 ORC2Q13416 577 aaPredicted RBP17.71■□□□□ 0.43
ZNF550-207ENST00000595560 MTERF2Q49AM1 385 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 ODR4Q5SWX8 454 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 SPRED2Q7Z698 418 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 NOSTRINQ8IVI9 506 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 LRRC71Q8N4P6 559 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 MTMR9Q96QG7 549 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
ZNF550-207ENST00000595560 YME1L1Q96TA2 773 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 LXNQ9BS40 222 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 TSPYL2Q9H2G4 693 aaPredicted RBP17.71■□□□□ 0.43
ZNF550-207ENST00000595560 CERS4Q9HA82 394 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 ERVK-5Q9HDB9 667 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 PCDHA12Q9UN75 941 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 AKT3Q9Y243 479 aa17.71■□□□□ 0.43
ZNF550-207ENST00000595560 NOC2LQ9Y3T9 749 aaKnown RBP17.71■□□□□ 0.43
ZNF550-207ENST00000595560 IGKV6-21A0A0C4DH24 114 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 RPS6KA5O75582 802 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.42
ZNF550-207ENST00000595560 ERVK-21P61565 698 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 GNL2Q13823 731 aaKnown RBP17.7■□□□□ 0.42
ZNF550-207ENST00000595560 TMEM266Q2M3C6 531 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 C4orf19Q8IY42 314 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 PPP1R16BQ96T49 567 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 OSMRQ99650 979 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 ADAMTS10Q9H324 1103 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 TMX1Q9H3N1 280 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 TTC12Q9H892 705 aaPredicted RBP17.7■□□□□ 0.42
ZNF550-207ENST00000595560 SUGCTQ9HAC7 445 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 WRAP73Q9P2S5 460 aaPredicted RBP17.7■□□□□ 0.42
ZNF550-207ENST00000595560 PPME1Q9Y570 386 aa17.7■□□□□ 0.42
ZNF550-207ENST00000595560 PRRC2BQ5JSZ5 2229 aaKnown RBP17.7■□□□□ 0.42
ZNF550-207ENST00000595560 GPR182O15218 404 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 POU3F3P20264 500 aaPredicted RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 IGFBP4P22692 258 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 MCM7P33993 719 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 NFX1Q12986 1120 aaKnown RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 PLA2G4FQ68DD2 849 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 RTN4RL1Q86UN2 441 aaPredicted RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 CRIPAKQ8N1N5 446 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 SLC17A8Q8NDX2 589 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 NEK9Q8TD19 979 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 JPH2Q9BR39 696 aaPredicted RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 SH2D3AQ9BRG2 576 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 ZSWIM4Q9H7M6 989 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 RC3H2Q9HBD1 1191 aaKnown RBP17.69■□□□□ 0.42
ZNF550-207ENST00000595560 CYP26B1Q9NR63 512 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 RGL1Q9NZL6 768 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 REV3LO60673 3130 aa17.69■□□□□ 0.42
ZNF550-207ENST00000595560 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 TXKP42681 527 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 DNM2P50570 870 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 GPC3P51654 580 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 DYDC2Q96IM9 177 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 HSD17B14Q9BPX1 270 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
ZNF550-207ENST00000595560 ST3GAL5Q9UNP4 418 aa17.68■□□□□ 0.42
ZNF550-207ENST00000595560 RFXAPO00287 272 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 SLITRK3O94933 977 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 LYPLA2O95372 231 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
ZNF550-207ENST00000595560 YWHABP31946 246 aaKnown RBP17.67■□□□□ 0.42
ZNF550-207ENST00000595560 CDC42EP1Q00587 391 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 CYP4A11Q02928 519 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 DRP2Q13474 957 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 CTTNQ14247 550 aaKnown RBP17.67■□□□□ 0.42
ZNF550-207ENST00000595560 TTC38Q5R3I4 469 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 EXOC8Q8IYI6 725 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 SLC7A3Q8WY07 619 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 CEP170P1Q96L14 293 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 SAMD11Q96NU1 681 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
ZNF550-207ENST00000595560 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
ZNF550-207ENST00000595560 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 MGEA5O60502 916 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 LPXNO60711 386 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 DGKIO75912 1065 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 OR52Z1P0C646 297 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 STAG3L1P0CL83 205 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 DARSP14868 501 aaKnown RBP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 RFC5P40937 340 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 NPEPPSP55786 919 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 GRB10Q13322 594 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 OTUD6AQ7L8S5 288 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms