RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 ZNF484Q5JVG2 852 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 RBM23Q86U06 439 aaKnown RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 P2RX5Q93086 422 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 GJA10Q969M2 543 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 ZNF668Q96K58 619 aaPredicted RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 OSMRQ99650 979 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 PCDHB7Q9Y5E2 793 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 MAFBQ9Y5Q3 323 aaPredicted RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 FNDC1Q4ZHG4 1894 aaPredicted RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 MYH9P35579 1960 aaKnown RBP14.13□□□□□ -0.15
UPF1-203ENST00000594504 ESYT2A0FGR8 921 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 TBKBP1A7MCY6 615 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 C22orf31O95567 290 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 ME3Q16798 604 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 METTL13Q8N6R0 699 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 BBXQ8WY36 941 aaPredicted RBP14.13□□□□□ -0.15
UPF1-203ENST00000594504 RGS18Q9NS28 235 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 TBC1D22BQ9NU19 505 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
UPF1-203ENST00000594504 COL1A2P08123 1366 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 C9IYK1 514 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 NCK2O43639 380 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 GPR32O75388 356 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 DEXIO95424 95 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 LARGE1O95461 756 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 PSAPP07602 524 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 FGFR1P11362 822 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 NRIP1P48552 1158 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 CLCN3P51790 818 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 SMAD2Q15796 467 aaKnown RBP14.12□□□□□ -0.15
UPF1-203ENST00000594504 SPOUT1Q5T280 376 aaKnown RBP14.12□□□□□ -0.15
UPF1-203ENST00000594504 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
UPF1-203ENST00000594504 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 ADHFE1Q8IWW8 467 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 REXO1Q8N1G1 1221 aaKnown RBP14.12□□□□□ -0.15
UPF1-203ENST00000594504 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 GTF3C6Q969F1 213 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 TYW1Q9NV66 732 aaKnown RBP14.12□□□□□ -0.15
UPF1-203ENST00000594504 CD207Q9UJ71 328 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 HCN4Q9Y3Q4 1203 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 SAMM50Q9Y512 469 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 PCDHA10Q9Y5I2 948 aa14.12□□□□□ -0.15
UPF1-203ENST00000594504 PER2O15055 1255 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 GPR182O15218 404 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 ST18O60284 1047 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 ALADP13716 330 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 GNA11P29992 359 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 CIITAP33076 1130 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 NDUFV1P49821 464 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 CRYBB1P53674 252 aaPredicted RBP14.11□□□□□ -0.15
UPF1-203ENST00000594504 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
UPF1-203ENST00000594504 NAALADL2Q58DX5 795 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 EFCAB12Q6NXP0 572 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 SLC24A5Q71RS6 500 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 FAM177A1Q8N128 213 aaPredicted RBP14.11□□□□□ -0.15
UPF1-203ENST00000594504 LRRC71Q8N4P6 559 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 MICAL1Q8TDZ2 1067 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 LENG9Q96B70 501 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 CLEC1BQ9P126 229 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 PRKAG3Q9UGI9 489 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 FAM50BQ9Y247 325 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
UPF1-203ENST00000594504 PRR33A8MZF0 331 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 MSH4O15457 936 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 DCXO43602 365 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 CHMP2AO43633 222 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 ZNF862O60290 1169 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 NLRP11P59045 1033 aaKnown RBP14.1□□□□□ -0.15
UPF1-203ENST00000594504 ERVFC1P60507 584 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
UPF1-203ENST00000594504 DSC3Q14574 896 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 UGCGQ16739 394 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
UPF1-203ENST00000594504 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 MSLNLQ96KJ4 702 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
UPF1-203ENST00000594504 CWH43Q9H720 699 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 C1orf112Q9NSG2 853 aa14.1□□□□□ -0.15
UPF1-203ENST00000594504 BARX2Q9UMQ3 279 aaPredicted RBP14.1□□□□□ -0.15
UPF1-203ENST00000594504 CTDNEP1O95476 244 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 GLP2RO95838 553 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 FGFR4P22455 802 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 NLRP5P59047 1200 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 FAM189BP81408 668 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
UPF1-203ENST00000594504 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 LRRC55Q6ZSA7 311 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 EFHBQ8N7U6 833 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
UPF1-203ENST00000594504 BICD2Q8TD16 824 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms