RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MAFO75444 373 aaPredicted RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 DRP2Q13474 957 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 AGO3Q9H9G7 860 aaKnown RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 TUFT1Q9NNX1 390 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 GPR32O75388 356 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 MED24O75448 989 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 SPATA31C1P0DKV0 1188 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 CD52P31358 61 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 RABGGTBP53611 331 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 CRYBB1P53674 252 aaPredicted RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 RESTQ13127 1097 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 RAB30Q15771 203 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 XKR9Q5GH70 373 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 ZNF697Q5TEC3 545 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.2
VRK3-206ENST00000594090 CATSPER3Q86XQ3 398 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 TMEM40Q8WWA1 233 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 OSMRQ99650 979 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 DHX33Q9H6R0 707 aaKnown RBP16.28■□□□□ 0.2
VRK3-206ENST00000594090 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 MTMR6Q9Y217 621 aa16.28■□□□□ 0.2
VRK3-206ENST00000594090 STX6O43752 255 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 RPA1P27694 616 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 RFC5P40937 340 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 GPC3P51654 580 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.19
VRK3-206ENST00000594090 NLRP11P59045 1033 aaKnown RBP16.27■□□□□ 0.19
VRK3-206ENST00000594090 PAK2Q13177 524 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 IL17AQ16552 155 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 Q7L0L9 218 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 TIFAQ96CG3 184 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 RAB34Q9BZG1 259 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 ADAMTS10Q9H324 1103 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 ANKEF1Q9NU02 776 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 MSRAQ9UJ68 235 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 PADI3Q9ULW8 664 aa16.27■□□□□ 0.19
VRK3-206ENST00000594090 YBX2Q9Y2T7 364 aaKnown RBP16.27■□□□□ 0.19
VRK3-206ENST00000594090 TMEM265A0A087WTH1 108 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.26■□□□□ 0.19
VRK3-206ENST00000594090 AMHP03971 560 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 RARRES1P49788 294 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 DNM2P50570 870 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 PDIA5Q14554 519 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 TMCO2Q7Z6W1 182 aaPredicted RBP16.26■□□□□ 0.19
VRK3-206ENST00000594090 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 PIGOQ8TEQ8 1089 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
VRK3-206ENST00000594090 LRWD1Q9UFC0 647 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 NOC2LQ9Y3T9 749 aaKnown RBP16.26■□□□□ 0.19
VRK3-206ENST00000594090 PCDHA11Q9Y5I1 949 aa16.26■□□□□ 0.19
VRK3-206ENST00000594090 GAS2O43903 313 aaKnown RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 MYOGP15173 224 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 MUTP22033 750 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 EMC2Q15006 297 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 FAM228AQ86W67 206 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 MYOCDQ8IZQ8 938 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 ZNF668Q96K58 619 aaPredicted RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 CCDC43Q96MW1 224 aaKnown RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 NKX2-4Q9H2Z4 354 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 TTYH1Q9H313 450 aaPredicted RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 ERVK-5Q9HDB9 667 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 SUCLA2Q9P2R7 463 aaPredicted RBP16.25■□□□□ 0.19
VRK3-206ENST00000594090 STK24Q9Y6E0 443 aa16.25■□□□□ 0.19
VRK3-206ENST00000594090 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 A0A087WWV3 80 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 GJB5O95377 273 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 BMP15O95972 392 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
VRK3-206ENST00000594090 CCT6AP40227 531 aaKnown RBP16.24■□□□□ 0.19
VRK3-206ENST00000594090 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
VRK3-206ENST00000594090 RHPN2Q8IUC4 686 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 NLRP7Q8WX94 980 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 LINC01599Q8WXQ3 324 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 SCLT1Q96NL6 688 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 MTRQ99707 1265 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
VRK3-206ENST00000594090 VWA3AA6NCI4 1184 aa16.23■□□□□ 0.19
VRK3-206ENST00000594090 TLL1O43897 1013 aa16.23■□□□□ 0.19
VRK3-206ENST00000594090 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms