RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 LRRC43Q8N309 656 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 CMASQ8NFW8 434 aaPredicted RBP13.76□□□□□ -0.21
ZNF558-202ENST00000593891 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 CLUAP1Q96AJ1 413 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 RGS18Q9NS28 235 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
ZNF558-202ENST00000593891 TMEM161AQ9NX61 479 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
ZNF558-202ENST00000593891 MSRB2Q9Y3D2 182 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 IGSF9BQ9UPX0 1349 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 ADAMTS20P59510 1910 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 HRO43593 1189 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
ZNF558-202ENST00000593891 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
ZNF558-202ENST00000593891 PLA2G2AP14555 144 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 PPFIA1Q13136 1202 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 CEP68Q76N32 757 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 ZNF605Q86T29 641 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 ABI1Q8IZP0 508 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 TMEM169Q96HH4 297 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 ADAM2Q99965 735 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 PXMP2Q9NR77 195 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 NOP58Q9Y2X3 529 aaKnown RBP13.75□□□□□ -0.21
ZNF558-202ENST00000593891 LOC400499M0QZD8 3231 aa13.75□□□□□ -0.21
ZNF558-202ENST00000593891 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 BCAR3O75815 825 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 KLRC2P26717 231 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 TDO2P48775 406 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 ALDH7A1P49419 539 aaKnown RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 TROAPQ12815 778 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 ZSCAN25Q6NSZ9 544 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 FAM49AQ9H0Q0 323 aaPredicted RBP13.74□□□□□ -0.21
ZNF558-202ENST00000593891 ZBP1Q9H171 429 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 ARRDC1-AS1Q9H2J1 176 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 PAG1Q9NWQ8 432 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 AKAP13Q12802 2813 aa13.74□□□□□ -0.21
ZNF558-202ENST00000593891 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
ZNF558-202ENST00000593891 C9IYK1 514 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 AXIN1O15169 862 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 CTSAP10619 480 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 CEACAM1P13688 526 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 CCR3P51677 355 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 POLGP54098 1239 aaPredicted RBP13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 GRIK4Q16099 956 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ODR4Q5SWX8 454 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 SH3PXD2AQ5TCZ1 1133 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ZNF852Q6ZMS4 543 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
ZNF558-202ENST00000593891 IER2Q9BTL4 223 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 MKNK1Q9BUB5 465 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 CELF4Q9BZC1 486 aaKnown RBP13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ELAC1Q9H777 363 aaKnown RBP13.73□□□□□ -0.21
ZNF558-202ENST00000593891 RAI2Q9Y5P3 530 aa13.73□□□□□ -0.21
ZNF558-202ENST00000593891 ABCB11O95342 1321 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 MAP3K13O43283 966 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 MGEA5O60502 916 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 CLCN4P51793 760 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 DAB2IPQ5VWQ8 1189 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 DPP7Q9UHL4 492 aa13.72□□□□□ -0.21
ZNF558-202ENST00000593891 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
ZNF558-202ENST00000593891 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 TENM4Q6N022 2769 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
ZNF558-202ENST00000593891 FAM189BP81408 668 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 SRSF5Q13243 272 aaKnown RBP13.71□□□□□ -0.21
ZNF558-202ENST00000593891 NEDD9Q14511 834 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 WTAPQ15007 396 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 METTL7BQ6UX53 244 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.21
ZNF558-202ENST00000593891 PHKBQ93100 1093 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 LRIG1Q96JA1 1093 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 LOXL4Q96JB6 756 aa13.71□□□□□ -0.21
ZNF558-202ENST00000593891 RPP25Q9BUL9 199 aaKnown RBP13.71□□□□□ -0.21
ZNF558-202ENST00000593891 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms