RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 E9PMD0 336 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 SLC26A4O43511 780 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 CAND2O75155 1236 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 CTSHP09668 335 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 CSF2RAP15509 400 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 RFC5P40937 340 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 CLCN3P51790 818 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 EPHB4P54760 987 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 KRT85P78386 507 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 MRPS6P82932 125 aaKnown RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 MGAT3Q09327 533 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 TMEM62Q0P6H9 643 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 DRP2Q13474 957 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 RSPH3Q86UC2 560 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 NME8Q8N427 588 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 TMEM199Q8N511 208 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 LEO1Q8WVC0 666 aaPredicted RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
TPM4-216ENST00000592822 OSBPL7Q9BZF2 842 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 CCSER1Q9C0I3 900 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 PCDHA7Q9UN72 937 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 TET1Q8NFU7 2136 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 KDM3AQ9Y4C1 1321 aa11.09□□□□□ -0.63
TPM4-216ENST00000592822 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
TPM4-216ENST00000592822 RSPH10B2B2RC85 870 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 CUTAO60888 179 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 NBNO60934 754 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 EYA4O95677 639 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 VTNP04004 478 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 RPLP2P05387 115 aaKnown RBP11.08□□□□□ -0.64
TPM4-216ENST00000592822 RSPH10BP0C881 870 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 ME1P48163 572 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
TPM4-216ENST00000592822 FPGSQ05932 587 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 EMC2Q15006 297 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
TPM4-216ENST00000592822 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 C16orf59Q7L2K0 433 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 SLC7A3Q8WY07 619 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 CALML4Q96GE6 196 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 BHMT2Q9H2M3 363 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 XPNPEP1Q9NQW7 623 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
TPM4-216ENST00000592822 CHMP5Q9NZZ3 219 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 CDY2AQ9Y6F7 541 aa11.08□□□□□ -0.64
TPM4-216ENST00000592822 A0A087X0B3 334 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 ARHGEF35A5YM69 484 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 USO1O60763 962 aaKnown RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 GPR32O75388 356 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 DGAT1O75907 488 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 ACRP10323 421 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 PLCG1P19174 1290 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 TMOD1P28289 359 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 RFC2P35250 354 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM4-216ENST00000592822 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 IER5Q5VY09 327 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 EXOC8Q8IYI6 725 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 TMEM143Q96AN5 459 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 CCDC43Q96MW1 224 aaKnown RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 MAP7D2Q96T17 732 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 PPP1R16BQ96T49 567 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 JPH2Q9BR39 696 aaPredicted RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 CELF4Q9BZC1 486 aaKnown RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 NT5C3AQ9H0P0 336 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 IL23AQ9NPF7 189 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 BLOC1S4Q9NUP1 217 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 SUCLA2Q9P2R7 463 aaPredicted RBP11.07□□□□□ -0.64
TPM4-216ENST00000592822 TRPV2Q9Y5S1 764 aa11.07□□□□□ -0.64
TPM4-216ENST00000592822 GAS2O43903 313 aaKnown RBP11.06□□□□□ -0.64
TPM4-216ENST00000592822 PARNO95453 639 aaKnown RBP11.06□□□□□ -0.64
TPM4-216ENST00000592822 CXCL10P02778 98 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 CYP11B2P19099 503 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 BMP8BP34820 402 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 ARL2P36404 184 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 DNM2P50570 870 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 GPC3P51654 580 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 SLC12A3P55017 1021 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 NLRP11P59045 1033 aaKnown RBP11.06□□□□□ -0.64
TPM4-216ENST00000592822 LPIN1Q14693 890 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 KIZQ2M2Z5 673 aa11.06□□□□□ -0.64
TPM4-216ENST00000592822 TCTN1Q2MV58 587 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms