RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 H3BQV1 296 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 C22orf31O95567 290 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 TJAP1Q5JTD0 557 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 ASB2Q96Q27 587 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 TMX1Q9H3N1 280 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 PADI3Q9ULW8 664 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 NOL7Q9UMY1 257 aaKnown RBP15.64■□□□□ 0.09
CLIP3-205ENST00000592017 PTPRSQ13332 1948 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 KDM3AQ9Y4C1 1321 aa15.64■□□□□ 0.09
CLIP3-205ENST00000592017 TMEM150BA6NC51 233 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 TXKP42681 527 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 ZNF174Q15697 407 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 TMEM266Q2M3C6 531 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 MTERF2Q49AM1 385 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 TTC38Q5R3I4 469 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 METTL13Q8N6R0 699 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 GINS2Q9Y248 185 aa15.63■□□□□ 0.09
CLIP3-205ENST00000592017 DDX11L8A8MPP1 907 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 CLCN3P51790 818 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 PSMC5P62195 406 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 MRPS5P82675 430 aaKnown RBP15.62■□□□□ 0.09
CLIP3-205ENST00000592017 CYP4A11Q02928 519 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 TFF2Q03403 129 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 NBR1Q14596 966 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 SKIV2LQ15477 1246 aaKnown RBP15.62■□□□□ 0.09
CLIP3-205ENST00000592017 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 CRIPAKQ8N1N5 446 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 LRRC71Q8N4P6 559 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 TMEM40Q8WWA1 233 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 SH2D3AQ9BRG2 576 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 TMEM60Q9H2L4 133 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 TTC12Q9H892 705 aaPredicted RBP15.62■□□□□ 0.09
CLIP3-205ENST00000592017 RC3H2Q9HBD1 1191 aaKnown RBP15.62■□□□□ 0.09
CLIP3-205ENST00000592017 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 PCDHA12Q9UN75 941 aa15.62■□□□□ 0.09
CLIP3-205ENST00000592017 NOC2LQ9Y3T9 749 aaKnown RBP15.62■□□□□ 0.09
CLIP3-205ENST00000592017 P4HBP07237 508 aaKnown RBP15.61■□□□□ 0.09
CLIP3-205ENST00000592017 LINC00271P0C7V0 271 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 QARSP47897 775 aaKnown RBP15.61■□□□□ 0.09
CLIP3-205ENST00000592017 SPIRE1Q08AE8 756 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 TBC1D8BQ0IIM8 1120 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 PAK2Q13177 524 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 EPHA7Q15375 998 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 XKR3Q5GH77 459 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 PLA2G4FQ68DD2 849 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 TMEM192Q8IY95 271 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 DYDC2Q96IM9 177 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 LXNQ9BS40 222 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
CLIP3-205ENST00000592017 ERVK-5Q9HDB9 667 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 RGL1Q9NZL6 768 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
CLIP3-205ENST00000592017 MAGEB2O15479 319 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 DKC1O60832 514 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 GPR32O75388 356 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 STBD1O95210 358 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 VTNP04004 478 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 OR52Z1P0C646 297 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 TRAPPC10P48553 1259 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 NFX1Q12986 1120 aaKnown RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 CUL4AQ13619 759 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 CTTNQ14247 550 aaKnown RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 KIZQ2M2Z5 673 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 LARP1BQ659C4 914 aaKnown RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 EFCAB12Q6NXP0 572 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 LINC01465Q8N7H1 131 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 ZNF689Q96CS4 500 aaPredicted RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 SAMD11Q96NU1 681 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 MTMR9Q96QG7 549 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 FTHL17Q9BXU8 183 aa15.6■□□□□ 0.09
CLIP3-205ENST00000592017 WRAP73Q9P2S5 460 aaPredicted RBP15.6■□□□□ 0.09
CLIP3-205ENST00000592017 POTEMA6NI47 508 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 K7ELQ4 463 aaPredicted RBP15.59■□□□□ 0.09
CLIP3-205ENST00000592017 MGEA5O60502 916 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 DGKIO75912 1065 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 BMP1P13497 986 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 TMOD1P28289 359 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 CRYBB1P53674 252 aaPredicted RBP15.59■□□□□ 0.09
CLIP3-205ENST00000592017 TARBP2Q15633 366 aaKnown RBP15.59■□□□□ 0.09
CLIP3-205ENST00000592017 TPH2Q8IWU9 490 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 FIBCD1Q8N539 461 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 OSMRQ99650 979 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 EIF2AK1Q9BQI3 630 aaKnown RBP15.59■□□□□ 0.09
CLIP3-205ENST00000592017 ST3GAL5Q9UNP4 418 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 MUC3AQ02505 3323 aa15.59■□□□□ 0.09
CLIP3-205ENST00000592017 MICAL3Q7RTP6 2002 aa15.58■□□□□ 0.09
CLIP3-205ENST00000592017 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 H3BNC9 293 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 RPS6KA5O75582 802 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 BMPR1AP36894 532 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 TECP42680 631 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 ORC2Q13416 577 aaPredicted RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 GPM6BQ13491 265 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms