RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 POLD1P28340 1107 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 CDKN1CP49918 316 aaPredicted RBP4.79□□□□□ -1.64
VMP1-212ENST00000591782 KCNQ1P51787 676 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 GJA9P57773 515 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 NFATC3Q12968 1075 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
VMP1-212ENST00000591782 NOLC1Q14978 699 aaKnown RBP eCLIP4.79□□□□□ -1.64
VMP1-212ENST00000591782 ZBTB41Q5SVQ8 909 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 GRAMD4Q6IC98 578 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 TIGD7Q6NT04 549 aaPredicted RBP4.79□□□□□ -1.64
VMP1-212ENST00000591782 UNQ6494/PRO21346Q6UXR6 183 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 Q6ZUG5 572 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 GPR155Q7Z3F1 870 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 SPATS2Q86XZ4 545 aaKnown RBP4.79□□□□□ -1.64
VMP1-212ENST00000591782 KLHL36Q8N4N3 616 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 MBD6Q96DN6 1003 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 ZDHHC5Q9C0B5 715 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 ZCCHC4Q9H5U6 513 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 BARX1Q9HBU1 254 aaPredicted RBP4.79□□□□□ -1.64
VMP1-212ENST00000591782 VTA1Q9NP79 307 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 PCDH12Q9NPG4 1184 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 FBXO10Q9UK96 956 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 CDC42EP3Q9UKI2 254 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 ZDHHC9Q9Y397 364 aa4.79□□□□□ -1.64
VMP1-212ENST00000591782 A0A0G2JNJ9 132 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 CUTAO60888 179 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 SASH1O94885 1247 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 SESN3P58005 492 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 ADCY2Q08462 1091 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 PTPROQ16827 1216 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 RNF219Q5W0B1 726 aaPredicted RBP4.78□□□□□ -1.64
VMP1-212ENST00000591782 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 KIAA1841Q6NSI8 718 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 FRMD7Q6ZUT3 714 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 RASSF3Q86WH2 238 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 ZDHHC14Q8IZN3 488 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 BCL6BQ8N143 479 aaPredicted RBP4.78□□□□□ -1.64
VMP1-212ENST00000591782 COG1Q8WTW3 980 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 KATNBL1Q9H079 304 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 XYLT2Q9H1B5 865 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 TOPORSQ9NS56 1045 aaPredicted RBP4.78□□□□□ -1.64
VMP1-212ENST00000591782 USP40Q9NVE5 1235 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 USP36Q9P275 1121 aaKnown RBP4.78□□□□□ -1.64
VMP1-212ENST00000591782 Q9UFV3 132 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 MAGEL2Q9UJ55 1249 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 ADAM29Q9UKF5 820 aa4.78□□□□□ -1.64
VMP1-212ENST00000591782 NOC2LQ9Y3T9 749 aaKnown RBP4.78□□□□□ -1.64
VMP1-212ENST00000591782 OTOL1A6NHN0 477 aaPredicted RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 MAFO75444 373 aaPredicted RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 HMGCRP04035 888 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 HMGB1P09429 215 aaKnown RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 ZNF888P0CJ79 500 aaPredicted RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 CDK11BP21127 795 aaKnown RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 CSF2RBP32927 897 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 ETV4P43268 484 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 STAT5BP51692 787 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 RRADP55042 308 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 KIAA2012Q0VF49 1180 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 FZD5Q13467 585 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 EIF4HQ15056 248 aaKnown RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 PDCD1Q15116 288 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 ESPNLQ6ZVH7 1005 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 CXorf67Q86X51 503 aaPredicted RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 REXO1L1PQ8IX06 675 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 IFNL2Q8IZJ0 200 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 PRPF38AQ8NAV1 312 aaKnown RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 OR5AN1Q8NGI8 311 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 RPGRQ92834 1020 aaKnown RBP4.77□□□□□ -1.65
VMP1-212ENST00000591782 MTG2Q9H4K7 406 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 PARD6AQ9NPB6 346 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 PTPN22Q9Y2R2 807 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
VMP1-212ENST00000591782 B4GALT3O60512 393 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 PRKD3O94806 890 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 INHBBP09529 407 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 CLEC2LP0C7M8 214 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 BCAR1P56945 870 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 ANTXR2P58335 489 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 EVA1CP58658 441 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 LARP4Q71RC2 724 aaKnown RBP eCLIP4.76□□□□□ -1.65
VMP1-212ENST00000591782 RALYLQ86SE5 291 aaKnown RBP4.76□□□□□ -1.65
VMP1-212ENST00000591782 FAM124AQ86V42 546 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 CMIPQ8IY22 773 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 KBTBD2Q8IY47 623 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 ZCRB1Q8TBF4 217 aaKnown RBP4.76□□□□□ -1.65
VMP1-212ENST00000591782 FERMT2Q96AC1 680 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 CARD11Q9BXL7 1154 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 ANO3Q9BYT9 981 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 PITHD1Q9GZP4 211 aaPredicted RBP4.76□□□□□ -1.65
VMP1-212ENST00000591782 KIAA1683Q9H0B3 1180 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 KCMF1Q9P0J7 381 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 DUSP10Q9Y6W6 482 aa4.76□□□□□ -1.65
VMP1-212ENST00000591782 ST20-MTHFSA0A0A6YYL1 179 aa4.75□□□□□ -1.65
VMP1-212ENST00000591782 PRSS38A1L453 326 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms