RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 LXNQ9BS40 222 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 DDX47Q9H0S4 455 aaKnown RBP18.29■□□□□ 0.52
CTDP1-207ENST00000591598 EVI5O60447 810 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 CEP55Q53EZ4 464 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 TRIM31Q9BZY9 425 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 UNC45AQ9H3U1 944 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 GOPCQ9HD26 462 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 OSGEPQ9NPF4 335 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 PCDHGC5Q9Y5F6 944 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 ARHGEF35A5YM69 484 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 H2AFZP0C0S5 128 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 PSMC2P35998 433 aaKnown RBP18.28■□□□□ 0.52
CTDP1-207ENST00000591598 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 H2AFVQ71UI9 128 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 METTL14Q9HCE5 456 aaKnown RBP18.28■□□□□ 0.52
CTDP1-207ENST00000591598 CIITAP33076 1130 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 STAT1P42224 750 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 IRX5P78411 483 aaPredicted RBP18.28■□□□□ 0.52
CTDP1-207ENST00000591598 HDLBPQ00341 1268 aaKnown RBP18.28■□□□□ 0.52
CTDP1-207ENST00000591598 ZIM3Q96PE6 472 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
CTDP1-207ENST00000591598 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 FRMD4BQ9Y2L6 1034 aa18.28■□□□□ 0.52
CTDP1-207ENST00000591598 IPO5O00410 1097 aaKnown RBP18.27■□□□□ 0.52
CTDP1-207ENST00000591598 PRELPP51888 382 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 DRAP1Q14919 205 aaPredicted RBP18.27■□□□□ 0.52
CTDP1-207ENST00000591598 CFAP58Q5T655 872 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 C1orf186Q6ZWK4 172 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 MAATS1Q7Z4T9 603 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 CASKIN2Q8WXE0 1202 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 DDX3XO00571 662 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTDP1-207ENST00000591598 ENTPD3O75355 529 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 CNKSR1Q969H4 720 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
CTDP1-207ENST00000591598 INPP4AQ96PE3 977 aaPredicted RBP18.27■□□□□ 0.52
CTDP1-207ENST00000591598 K7ENM7 598 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 ZEB2O60315 1214 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 PSMD10O75832 226 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 KIF4AO95239 1232 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 FOXR2Q6PJQ5 311 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 MSL3Q8N5Y2 521 aaKnown RBP18.27■□□□□ 0.51
CTDP1-207ENST00000591598 PDGFDQ9GZP0 370 aaPredicted RBP18.27■□□□□ 0.51
CTDP1-207ENST00000591598 SIX2Q9NPC8 291 aa18.27■□□□□ 0.51
CTDP1-207ENST00000591598 ITGA4P13612 1032 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 COPB2P35606 906 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 PLCB1Q9NQ66 1216 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 ZNF70Q9UC06 446 aaPredicted RBP18.26■□□□□ 0.51
CTDP1-207ENST00000591598 CCPG1Q9ULG6 757 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 SLX4Q8IY92 1834 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 SPDYE2BA6NHP3 402 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 HIP1RO75146 1068 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 SPDYE6P0CI01 402 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 GALCP54803 685 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 METTL13Q8N6R0 699 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
CTDP1-207ENST00000591598 RRP15Q9Y3B9 282 aaKnown RBP18.26■□□□□ 0.51
CTDP1-207ENST00000591598 TMEM110-MUSTN1A8MSY1 372 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 FMO5P49326 533 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 TNNC1P63316 161 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 PAK2Q13177 524 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 LLGL1Q15334 1064 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 CHURC1Q8WUH1 139 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 WDR11Q9BZH6 1224 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 KRIT1O00522 736 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ALAS1P13196 640 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
CTDP1-207ENST00000591598 GNGT1P63211 74 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ITIH3Q06033 890 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 IL31RAQ8NI17 732 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 AGPAT3Q9NRZ7 376 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 AMACRQ9UHK6 382 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ZMYM2Q9UBW7 1377 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 NFIBO00712 420 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 SORBS3O60504 671 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 IVLP07476 585 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 GAP43P17677 238 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 MCTP2Q6DN12 878 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ZNF746Q6NUN9 644 aaPredicted RBP18.25■□□□□ 0.51
CTDP1-207ENST00000591598 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 PALB2Q86YC2 1186 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 ZC3H3Q8IXZ2 948 aaKnown RBP18.25■□□□□ 0.51
CTDP1-207ENST00000591598 TPCN2Q8NHX9 752 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 NACC1Q96RE7 527 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 MRIQ9BWK5 157 aa18.25■□□□□ 0.51
CTDP1-207ENST00000591598 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
CTDP1-207ENST00000591598 BZW2Q9Y6E2 419 aaKnown RBP18.25■□□□□ 0.51
CTDP1-207ENST00000591598 GOLGA8IPA6NC78 632 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms