RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 FAM177A1Q8N128 213 aaPredicted RBP12.42□□□□□ -0.42
GFAP-217ENST00000590922 SPPL3Q8TCT6 385 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 TBCKQ8TEA7 893 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 WASF1Q92558 559 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
GFAP-217ENST00000590922 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 JPH1Q9HDC5 661 aaPredicted RBP12.42□□□□□ -0.42
GFAP-217ENST00000590922 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 TUBE1Q9UJT0 475 aa12.42□□□□□ -0.42
GFAP-217ENST00000590922 MRPL42Q9Y6G3 142 aaKnown RBP12.42□□□□□ -0.42
GFAP-217ENST00000590922 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
GFAP-217ENST00000590922 NFASCO94856 1347 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 DHX15O43143 795 aaKnown RBP12.41□□□□□ -0.42
GFAP-217ENST00000590922 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
GFAP-217ENST00000590922 NRIP1P48552 1158 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 USP11P51784 963 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 PPFIA1Q13136 1202 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 INF2Q27J81 1249 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 LENG9Q96B70 501 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 PHF7Q9BWX1 381 aaPredicted RBP12.41□□□□□ -0.42
GFAP-217ENST00000590922 SH2B1Q9NRF2 756 aaPredicted RBP12.41□□□□□ -0.42
GFAP-217ENST00000590922 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
GFAP-217ENST00000590922 LOXHD1Q8IVV2 1947 aa12.41□□□□□ -0.42
GFAP-217ENST00000590922 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 IPO5O00410 1097 aaKnown RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 GFRA3O60609 400 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 TDP2O95551 362 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 GLP2RO95838 553 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 CCNE2O96020 404 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 RPLP2P05387 115 aaKnown RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 ACTR2P61160 394 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 NONOQ15233 471 aaKnown RBP eCLIP12.4□□□□□ -0.42
GFAP-217ENST00000590922 GRIK4Q16099 956 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 EARS2Q5JPH6 523 aaKnown RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 RBM23Q86U06 439 aaKnown RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 NPAS4Q8IUM7 802 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 CRIPAKQ8N1N5 446 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 POF1BQ8WVV4 589 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 DNAJB3Q8WWF6 145 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 LINC01599Q8WXQ3 324 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 GJA10Q969M2 543 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 PCYT2Q99447 389 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 ZNF577Q9BSK1 485 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 FTHL17Q9BXU8 183 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 IRF2BPLQ9H1B7 796 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 AGO3Q9H9G7 860 aaKnown RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 ERAP1Q9NZ08 941 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
GFAP-217ENST00000590922 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
GFAP-217ENST00000590922 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 CCDC194A0A1B0GVG4 234 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 MSH4O15457 936 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 STAG3L1P0CL83 205 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 ATF7P17544 494 aaPredicted RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 MARK3P27448 753 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 CD52P31358 61 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 GUCY1B3Q02153 619 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 NR5A1Q13285 461 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 PAN2Q504Q3 1202 aaKnown RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 MARCH8Q5T0T0 291 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 IER5Q5VY09 327 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 GLG1Q92896 1179 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 ASIC4Q96FT7 647 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 RPGRIP1Q96KN7 1286 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
GFAP-217ENST00000590922 TLE6Q9H808 572 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
GFAP-217ENST00000590922 CYP3A7-CYP3A51PA0A087WV96 503 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 FSD2A1L4K1 749 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 BTBD18B2RXH4 712 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 M0QZ92 97 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 ATG7O95352 703 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 CYP3A7P24462 503 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 KRT2P35908 639 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
GFAP-217ENST00000590922 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
GFAP-217ENST00000590922 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
GFAP-217ENST00000590922 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
GFAP-217ENST00000590922 SLC37A4O43826 429 aa12.37□□□□□ -0.43
GFAP-217ENST00000590922 AVPR2P30518 371 aa12.37□□□□□ -0.43
GFAP-217ENST00000590922 STAT5BP51692 787 aa12.37□□□□□ -0.43
GFAP-217ENST00000590922 IGBP1P78318 339 aa12.37□□□□□ -0.43
GFAP-217ENST00000590922 FOXK2Q01167 660 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms