RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PLA2G4FQ68DD2 849 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 ADAMTS10Q9H324 1103 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 TMX1Q9H3N1 280 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 CERS4Q9HA82 394 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 SUGCTQ9HAC7 445 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 ZBTB39O15060 712 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 UPP2O95045 317 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 CRYBB1P53674 252 aaPredicted RBP25.07■■□□□ 1.6
MBD3-208ENST00000590830 NPEPPSP55786 919 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 HTRA4P83105 476 aaPredicted RBP25.07■■□□□ 1.6
MBD3-208ENST00000590830 TBC1D8BQ0IIM8 1120 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 CTTNQ14247 550 aaKnown RBP25.07■■□□□ 1.6
MBD3-208ENST00000590830 NBR1Q14596 966 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 HSD17B14Q9BPX1 270 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 EIF2AK1Q9BQI3 630 aaKnown RBP25.07■■□□□ 1.6
MBD3-208ENST00000590830 LXNQ9BS40 222 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 ERVK-5Q9HDB9 667 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 MICAL3Q7RTP6 2002 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 EVPLQ92817 2033 aa25.07■■□□□ 1.6
MBD3-208ENST00000590830 EPOPA6NHQ4 379 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 RFXAPO00287 272 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 FOSL2P15408 326 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 NLRP11P59045 1033 aaKnown RBP25.06■■□□□ 1.6
MBD3-208ENST00000590830 CYP4A11Q02928 519 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 TTC38Q5R3I4 469 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 C4orf19Q8IY42 314 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 C4orf32Q8N8J7 132 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 ZNF668Q96K58 619 aaPredicted RBP25.06■■□□□ 1.6
MBD3-208ENST00000590830 OSMRQ99650 979 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 AKT3Q9Y243 479 aa25.06■■□□□ 1.6
MBD3-208ENST00000590830 MAFO75444 373 aaPredicted RBP25.05■■□□□ 1.6
MBD3-208ENST00000590830 TMOD1P28289 359 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 PAK2Q13177 524 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 CUL4AQ13619 759 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 GNL2Q13823 731 aaKnown RBP25.05■■□□□ 1.6
MBD3-208ENST00000590830 TPH2Q8IWU9 490 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 CYP26B1Q9NR63 512 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 INSL6Q9Y581 213 aa25.05■■□□□ 1.6
MBD3-208ENST00000590830 RPS6KA5O75582 802 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 TRAPPC10P48553 1259 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 NFX1Q12986 1120 aaKnown RBP25.04■■□□□ 1.6
MBD3-208ENST00000590830 CRIPAKQ8N1N5 446 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 MAP7D2Q96T17 732 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 ZSWIM4Q9H7M6 989 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 ST3GAL5Q9UNP4 418 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 SMC3Q9UQE7 1217 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 KIF3AQ9Y496 699 aa25.04■■□□□ 1.6
MBD3-208ENST00000590830 LINC01553A4QN01 128 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 POTEMA6NI47 508 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 MGEA5O60502 916 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 DKC1O60832 514 aaKnown RBP eCLIP25.03■■□□□ 1.6
MBD3-208ENST00000590830 YWHABP31946 246 aaKnown RBP25.03■■□□□ 1.6
MBD3-208ENST00000590830 GPC3P51654 580 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 ORC2Q13416 577 aaPredicted RBP25.03■■□□□ 1.6
MBD3-208ENST00000590830 FAM228AQ86W67 206 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 SP7Q8TDD2 431 aaPredicted RBP25.03■■□□□ 1.6
MBD3-208ENST00000590830 PCDHB6Q9Y5E3 794 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 EYSQ5T1H1 3165 aa25.03■■□□□ 1.6
MBD3-208ENST00000590830 A0A087WWV3 80 aa25.02■■□□□ 1.6
MBD3-208ENST00000590830 ARNTL2Q8WYA1 636 aa25.02■■□□□ 1.6
MBD3-208ENST00000590830 CEP170P1Q96L14 293 aa25.02■■□□□ 1.6
MBD3-208ENST00000590830 FTHL17Q9BXU8 183 aa25.02■■□□□ 1.6
MBD3-208ENST00000590830 TSPYL2Q9H2G4 693 aaPredicted RBP25.02■■□□□ 1.6
MBD3-208ENST00000590830 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.02■■□□□ 1.6
MBD3-208ENST00000590830 LYPLA2O95372 231 aa25.01■■□□□ 1.59
MBD3-208ENST00000590830 OR52Z1P0C646 297 aa25.01■■□□□ 1.59
MBD3-208ENST00000590830 SPATA31C1P0DKV0 1188 aa25.01■■□□□ 1.59
MBD3-208ENST00000590830 TECP42680 631 aa25.01■■□□□ 1.59
MBD3-208ENST00000590830 MCTP1Q6DN14 999 aa25.01■■□□□ 1.59
MBD3-208ENST00000590830 MAFAQ8NHW3 353 aaPredicted RBP25.01■■□□□ 1.59
MBD3-208ENST00000590830 DHX33Q9H6R0 707 aaKnown RBP25.01■■□□□ 1.59
MBD3-208ENST00000590830 SUCLA2Q9P2R7 463 aaPredicted RBP25.01■■□□□ 1.59
MBD3-208ENST00000590830 NOL7Q9UMY1 257 aaKnown RBP25.01■■□□□ 1.59
MBD3-208ENST00000590830 EIF4BP23588 611 aaKnown RBP25■■□□□ 1.59
MBD3-208ENST00000590830 ERVK-21P61565 698 aa25■■□□□ 1.59
MBD3-208ENST00000590830 KSR1Q8IVT5 923 aa25■■□□□ 1.59
MBD3-208ENST00000590830 YME1L1Q96TA2 773 aa25■■□□□ 1.59
MBD3-208ENST00000590830 GAS2L1Q99501 681 aaPredicted RBP25■■□□□ 1.59
MBD3-208ENST00000590830 GPR182O15218 404 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 DARSP14868 501 aaKnown RBP24.99■■□□□ 1.59
MBD3-208ENST00000590830 MYO9BQ13459 2157 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 DSC3Q14574 896 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 XKR9Q5GH70 373 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 OTUD6AQ7L8S5 288 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 LOXHD1Q8IVV2 1947 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 ZNF710Q8N1W2 664 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 NEK9Q8TD19 979 aa24.99■■□□□ 1.59
MBD3-208ENST00000590830 RC3H2Q9HBD1 1191 aaKnown RBP24.99■■□□□ 1.59
MBD3-208ENST00000590830 H3BQV1 296 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 MED24O75448 989 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 CSDE1O75534 798 aaKnown RBP24.98■■□□□ 1.59
MBD3-208ENST00000590830 FGFR4P22455 802 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 IGFBP4P22692 258 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 DNM2P50570 870 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 PTGDRQ13258 359 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 LARP1BQ659C4 914 aaKnown RBP24.98■■□□□ 1.59
MBD3-208ENST00000590830 CATSPER3Q86XQ3 398 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 TMEM143Q96AN5 459 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 ZNF689Q96CS4 500 aaPredicted RBP24.98■■□□□ 1.59
MBD3-208ENST00000590830 TGS1Q96RS0 853 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms