RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PNMA5Q96PV4 448 aa18.53■□□□□ 0.56
GCDH-213ENST00000590627 TSPYL2Q9H2G4 693 aaPredicted RBP18.53■□□□□ 0.56
GCDH-213ENST00000590627 RGL1Q9NZL6 768 aa18.53■□□□□ 0.56
GCDH-213ENST00000590627 SAMM50Q9Y512 469 aa18.53■□□□□ 0.56
GCDH-213ENST00000590627 TRIP12Q14669 1992 aaPredicted RBP18.52■□□□□ 0.56
GCDH-213ENST00000590627 NOP56O00567 594 aaKnown RBP18.52■□□□□ 0.56
GCDH-213ENST00000590627 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
GCDH-213ENST00000590627 SORBS3O60504 671 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 ZNF202O95125 648 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 POU3F3P20264 500 aaPredicted RBP18.52■□□□□ 0.56
GCDH-213ENST00000590627 QARSP47897 775 aaKnown RBP18.52■□□□□ 0.56
GCDH-213ENST00000590627 PSMC5P62195 406 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 E2F4Q16254 413 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 ECM1Q16610 540 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 PTGISQ16647 500 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 RRAGBQ5VZM2 374 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 IQUBQ8NA54 791 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 AFAP1L1Q8TED9 768 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 PPP1R13LQ8WUF5 828 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 DYDC2Q96IM9 177 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 TIGD1Q96MW7 591 aa18.52■□□□□ 0.56
GCDH-213ENST00000590627 TET1Q8NFU7 2136 aa18.52■□□□□ 0.55
GCDH-213ENST00000590627 DKC1O60832 514 aaKnown RBP eCLIP18.51■□□□□ 0.55
GCDH-213ENST00000590627 PPFIA4O75335 1185 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 NR1I2O75469 434 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 LGR5O75473 907 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
GCDH-213ENST00000590627 CA3P07451 260 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 PLCG1P19174 1290 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 SP4Q02446 784 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 RBL2Q08999 1139 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 DGKDQ16760 1214 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 KLHL40Q2TBA0 621 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 NAALADL2Q58DX5 795 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 C4orf19Q8IY42 314 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 KAT2BQ92831 832 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 ATP6V0A1Q93050 837 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 CDK5RAP3Q96JB5 506 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 LXNQ9BS40 222 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 PANK2Q9BZ23 570 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 CUEDC2Q9H467 287 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 ZSWIM4Q9H7M6 989 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 DACT1Q9NYF0 836 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 STK17AQ9UEE5 414 aa18.51■□□□□ 0.55
GCDH-213ENST00000590627 IGSF9BQ9UPX0 1349 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 ACTN4O43707 911 aaKnown RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 SLFN14P0C7P3 912 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
GCDH-213ENST00000590627 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 CHMP4BP1P59074 171 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 CYP4A11Q02928 519 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 CTTNQ14247 550 aaKnown RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 GDF6Q6KF10 455 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 SWSAP1Q6NVH7 229 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 HERC6Q8IVU3 1022 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 CCDC60Q8IWA6 550 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 TPH2Q8IWU9 490 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 ELOA2Q8IYF1 753 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 PDILTQ8N807 584 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 PCYT2Q99447 389 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 KATNAL1Q9BW62 490 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 DDX19AQ9NUU7 478 aaKnown RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 WRAP73Q9P2S5 460 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 GABBR1Q9UBS5 961 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 KIAA1024Q9UPX6 916 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
GCDH-213ENST00000590627 DOCK5Q9H7D0 1870 aa18.5■□□□□ 0.55
GCDH-213ENST00000590627 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 GTPBP6O43824 516 aaPredicted RBP18.49■□□□□ 0.55
GCDH-213ENST00000590627 TRAK2O60296 914 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 STAT6P42226 847 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
GCDH-213ENST00000590627 UGCGQ16739 394 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 LONRF3Q496Y0 759 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 FAM160B1Q5W0V3 765 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 PDXDC2PQ6P474 469 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 POTEGQ6S5H5 508 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 PLPPR4Q7Z2D5 763 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 BANK1Q8NDB2 785 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 ADAMTS19Q8TE59 1207 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 LRRC15Q8TF66 581 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 DHX58Q96C10 678 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 NACC1Q96RE7 527 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 MAGEF1Q9HAY2 307 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 ZNF302Q9NR11 478 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 BLOC1S4Q9NUP1 217 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 GTF2IRD1Q9UHL9 959 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 BDP1A6H8Y1 2624 aa18.49■□□□□ 0.55
GCDH-213ENST00000590627 PRRC2BQ5JSZ5 2229 aaKnown RBP18.49■□□□□ 0.55
GCDH-213ENST00000590627 REV3LO60673 3130 aa18.48■□□□□ 0.55
GCDH-213ENST00000590627 XIRP2A4UGR9 3374 aa18.48■□□□□ 0.55
GCDH-213ENST00000590627 BACH1O14867 736 aa18.48■□□□□ 0.55
GCDH-213ENST00000590627 KINO60870 393 aaKnown RBP18.48■□□□□ 0.55
GCDH-213ENST00000590627 SELPP16109 830 aa18.48■□□□□ 0.55
GCDH-213ENST00000590627 KCNJ6P48051 423 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms