RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CABP7Q86V35 215 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 CNNM3Q8NE01 707 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 ETNPPLQ8TBG4 499 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 NACC1Q96RE7 527 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 APBA2Q99767 749 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 TIPINQ9BVW5 301 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 CSRNP2Q9H175 543 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 NUP62CLQ9H1M0 184 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 TNMDQ9H2S6 317 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 AGO4Q9HCK5 861 aaKnown RBP8.19□□□□□ -1.1
SMAD4-210ENST00000590061 CPA4Q9UI42 421 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 DNM3Q9UQ16 869 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 Q9Y3F1 56 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 ADGRA2Q96PE1 1338 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
SMAD4-210ENST00000590061 FAM86B1E9PN63 330 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 MSH4O15457 936 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 KPNA6O60684 536 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 PSMD10O75832 226 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 KIF20AO95235 890 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 PSAPP07602 524 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 FAM86B2P0C5J1 330 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 PFKFB1P16118 471 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 ITGB5P18084 799 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 GAS6Q14393 721 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 HYIQ5T013 277 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 FAM160B1Q5W0V3 765 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 METTL7BQ6UX53 244 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 SV2BQ7L1I2 683 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 OTOP1Q7RTM1 612 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 TRIML1Q8N9V2 468 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 SLC17A8Q8NDX2 589 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 TBC1D5Q92609 795 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 POM121Q96HA1 1249 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 PGBD1Q96JS3 809 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 FAM167AQ96KS9 214 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 CCDC43Q96MW1 224 aaKnown RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 TINF2Q9BSI4 451 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 SPC25Q9HBM1 224 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-210ENST00000590061 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 DACT1Q9NYF0 836 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 HPSEQ9Y251 543 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 PCDHA10Q9Y5I2 948 aa8.18□□□□□ -1.1
SMAD4-210ENST00000590061 ZNF236Q9UL36 1845 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 CDC14CA4D256 554 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 NOP56O00567 594 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 POLR2DO15514 142 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SLC37A4O43826 429 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 ZEB2O60315 1214 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MSCO60682 206 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 DTNBO60941 627 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 FKTNO75072 461 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 LYPLA2O95372 231 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 STAU1O95793 577 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 CCDC192P0DO97 292 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SOX11P35716 441 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 CCT6AP40227 531 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 PSMC4P43686 418 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 PSMC5P62195 406 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MRPS9P82933 396 aaKnown RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 POU4F2Q12837 409 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SHC4Q6S5L8 630 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SASS6Q6UVJ0 657 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 HAS1Q92839 578 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 LENG9Q96B70 501 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MAML3Q96JK9 1138 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 JPH2Q9BR39 696 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-210ENST00000590061 PORCNQ9H237 461 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 CLSTN2Q9H4D0 955 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 MLXIPQ9HAP2 919 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 NRBP2Q9NSY0 501 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 COL20A1Q9P218 1284 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SLC9A2Q9UBY0 812 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 DYRK1BQ9Y463 629 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 SAMM50Q9Y512 469 aa8.17□□□□□ -1.1
SMAD4-210ENST00000590061 PCNTO95613 3336 aa8.16□□□□□ -1.1
SMAD4-210ENST00000590061 A0A1B0GVL5 298 aa8.16□□□□□ -1.1
SMAD4-210ENST00000590061 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms