RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 DMTNQ08495 405 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 VGLL4Q14135 290 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 MYBPC2Q14324 1141 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 ASIC2Q16515 512 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 EPM2AIP1Q7L775 607 aaPredicted RBP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 NELFCDQ8IXH7 590 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 LRRN4CLQ8ND94 238 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 BAP1Q92560 729 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 REEP2Q9BRK0 252 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 TIPINQ9BVW5 301 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 MAF1Q9H063 256 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 FBXL5Q9UKA1 691 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 HYOU1Q9Y4L1 999 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 BAZ2BQ9UIF8 2168 aaKnown RBP11.63□□□□□ -0.55
ZNF540-208ENST00000589857 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 A0A1W2PPC1 479 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 PSMD10O75832 226 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 GFPT2O94808 682 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 ICAM1P05362 532 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 PAFAH1B1P43034 410 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 KLK7P49862 253 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 USP14P54578 494 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 ARSHQ5FYA8 562 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
ZNF540-208ENST00000589857 SFR1Q86XK3 245 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF577Q9BSK1 485 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 BHMT2Q9H2M3 363 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 PARVGQ9HBI0 331 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF446Q9NWS9 450 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 ARHGAP20Q9P2F6 1191 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 SIPA1L1O43166 1804 aa11.63□□□□□ -0.55
ZNF540-208ENST00000589857 FRMPD4Q14CM0 1322 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 GCNT3O95395 438 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 MYCP01106 439 aaPredicted RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 NR3C1P04150 777 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 MAPTP10636 758 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 RFX1P22670 979 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 GHRHRQ02643 423 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 PPATQ06203 517 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 KLHL30Q0D2K2 578 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 PPIL2Q13356 520 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 EXOC3L4Q17RC7 722 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 CCDC181Q5TID7 509 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 PRPF38AQ8NAV1 312 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SH3TC2Q8TF17 1288 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 HSD17B14Q9BPX1 270 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 JADE2Q9NQC1 790 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 AIPL1Q9NZN9 384 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 TBC1D7Q9P0N9 293 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SNX12Q9UMY4 172 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
ZNF540-208ENST00000589857 KIAA0100Q14667 2235 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
ZNF540-208ENST00000589857 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 MEIS1O00470 390 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 OPLAHO14841 1288 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 N4BP1O75113 896 aaKnown RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 FLOT1O75955 427 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 ATP1A1P05023 1023 aaKnown RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 GJB1P08034 283 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 GRK4P32298 578 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 GJA8P48165 433 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 HSD17B4P51659 736 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 SNAP25P60880 206 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 POLR2FP61218 127 aaKnown RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 KCNH2Q12809 1159 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 PPP2R5AQ15172 486 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 HSP90B2PQ58FF3 399 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 TPH2Q8IWU9 490 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 MYCT1Q8N699 235 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms