RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CDKAL1Q5VV42 579 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 ZNF746Q6NUN9 644 aaPredicted RBP11.29□□□□□ -0.6
APOC1-205ENST00000589781 RINT1Q6NUQ1 792 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 ARRDC4Q8NCT1 418 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 P2RX5Q93086 422 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 JPH1Q9HDC5 661 aaPredicted RBP11.29□□□□□ -0.6
APOC1-205ENST00000589781 INTS13Q9NVM9 706 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
APOC1-205ENST00000589781 GRIN2DO15399 1336 aa11.29□□□□□ -0.6
APOC1-205ENST00000589781 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TMEM150BA6NC51 233 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 ASB14A6NK59 587 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 CCNE1P24864 410 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 CST5P28325 142 aaPredicted RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 SFNP31947 248 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 ICAM3P32942 547 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 MAGEA10P43363 369 aaPredicted RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 FXR1P51114 621 aaKnown RBP eCLIP11.28□□□□□ -0.6
APOC1-205ENST00000589781 ACLYP53396 1101 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TRIM60Q495X7 471 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 COPS5Q92905 334 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 SENP7Q9BQF6 1050 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 GTPBP4Q9BZE4 634 aaKnown RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 ZSWIM4Q9H7M6 989 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
APOC1-205ENST00000589781 SLC9A2Q9UBY0 812 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
APOC1-205ENST00000589781 BICDL2A1A5D9 508 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 GOLGA6L6A8MZA4 724 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 BACH1O14867 736 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 MAFGO15525 162 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 USO1O60763 962 aaKnown RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 EIF3JO75822 258 aaKnown RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 FAM13AO94988 1023 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 PPP1R2P41236 205 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 CDK7P50613 346 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 CASP5P51878 434 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 UBASH3AP57075 661 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 ACTR2P61160 394 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 PSMC5P62195 406 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 SP2Q02086 613 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 TNFAIP2Q03169 654 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 TLE2Q04725 743 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 PSMD2Q13200 908 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 C1orf186Q6ZWK4 172 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 CCDC60Q8IWA6 550 aaPredicted RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
APOC1-205ENST00000589781 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 GABBR1Q9UBS5 961 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.614e-6■□□□□ 11
APOC1-205ENST00000589781 IGSF9BQ9UPX0 1349 aa11.27□□□□□ -0.61
APOC1-205ENST00000589781 B4DLN1 442 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 DYNC1LI2O43237 492 aaPredicted RBP11.26□□□□□ -0.61
APOC1-205ENST00000589781 LYPLA2O95372 231 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 ASGR1P07306 291 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 PSAPP07602 524 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 C6orf222P0C671 652 aaPredicted RBP11.26□□□□□ -0.61
APOC1-205ENST00000589781 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 MYBP10242 640 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
APOC1-205ENST00000589781 MAPK7Q13164 816 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 IQSEC1Q6DN90 963 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
APOC1-205ENST00000589781 APTXQ7Z2E3 356 aaKnown RBP11.26□□□□□ -0.61
APOC1-205ENST00000589781 TRMT1LQ7Z2T5 733 aaKnown RBP11.26□□□□□ -0.61
APOC1-205ENST00000589781 CCDC186Q7Z3E2 898 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms