RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-218	ENST00000588344	AMPD3	Q01432	767 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	GRB10	Q13322	594 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	MXD4	Q14582	209 aa	Predicted RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	ECM1	Q16610	540 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	FAM26D	Q5JW98	314 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	ODR4	Q5SWX8	454 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	RESP18	Q5W5W9	173 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	MFSD5	Q6N075	450 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	SHC4	Q6S5L8	630 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	CLEC17A	Q6ZS10	378 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	RPUSD2	Q8IZ73	545 aa	Known RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	KIAA0319L	Q8IZA0	1049 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	PSPC1	Q8WXF1	523 aa	Known RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	GBP4	Q96PP9	640 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	CTAGE1	Q96RT6	745 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	MTR	Q99707	1265 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	NOC4L	Q9BVI4	516 aa	Known RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	BHMT2	Q9H2M3	363 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	SUGCT	Q9HAC7	445 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	C17orf75	Q9HAS0	396 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	MAGEF1	Q9HAY2	307 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	ATP6V0A4	Q9HBG4	840 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	SQOR	Q9Y6N5	450 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	TRIM43B	A6NCK2	446 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	RSPH10B2	B2RC85	870 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	PFKM	P08237	780 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	IQCF3	P0C7M6	154 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	PLA2G4B	P0C869	781 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	RSPH10B	P0C881	870 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	SCP2	P22307	547 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	STAT6	P42226	847 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	CRYBB1	P53674	252 aa	Predicted RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	POU5F1B	Q06416	359 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	HIC1	Q14526	733 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	KARS	Q15046	597 aa	Known RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	TRIM71	Q2Q1W2	868 aa	Known RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	SPECC1	Q5M775	1068 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	PLA2G4F	Q68DD2	849 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	PADI6	Q6TGC4	694 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	SV2B	Q7L1I2	683 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	LRRC8D	Q7L1W4	858 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	TRAPPC12	Q8WVT3	735 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	DNAJB3	Q8WWF6	145 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	KIFAP3	Q92845	792 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	DRC1	Q96MC2	740 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	PNMA5	Q96PV4	448 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	INO80B	Q9C086	356 aa	Predicted RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	KCNH3	Q9ULD8	1083 aa		10.08	□□□□□ -0.8
CIRBP-218	ENST00000588344	FAM237A	A0A1B0GTK4	181 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344		E9PMD0	336 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	ZBTB39	O15060	712 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PLCG1	P19174	1290 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	GUCY2C	P25092	1073 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	ABCD1	P33897	745 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	SLC12A3	P55017	1021 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	MRPS6	P82932	125 aa	Known RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PPIG	Q13427	754 aa	Known RBP eCLIP	10.07	□□□□□ -0.8	2e-10	■■■□□ 15.4
CIRBP-218	ENST00000588344	TFDP1	Q14186	410 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	EMC2	Q15006	297 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PPP2R5A	Q15172	486 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	RUFY4	Q6ZNE9	571 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	USP49	Q70CQ1	688 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	ZNF410	Q86VK4	478 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	CEP57L1	Q8IYX8	460 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	LINC01465	Q8N7H1	131 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	TMEM87A	Q8NBN3	555 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PPP1R13L	Q8WUF5	828 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	MRPS27	Q92552	414 aa	Known RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	LARP4B	Q92615	738 aa	Known RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	DHX38	Q92620	1227 aa	Known RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	RAD54L	Q92698	747 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	CELF4	Q9BZC1	486 aa	Known RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	AKT3	Q9Y243	479 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	PHLPP2	Q6ZVD8	1323 aa		10.07	□□□□□ -0.8
CIRBP-218	ENST00000588344	SCN10A	Q9Y5Y9	1956 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	TMEM150B	A6NC51	233 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	GOLGA6L22	H0YM25	854 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	POLR2D	O15514	142 aa	Known RBP	10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	SSB	P05455	408 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	MYL1	P05976	194 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	SLFN14	P0C7P3	912 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	CYP2C18	P33260	490 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	ARL2	P36404	184 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	SYK	P43405	635 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	CLCN3	P51790	818 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	NCBP1	Q09161	790 aa	Known RBP	10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	ZNF618	Q5T7W0	954 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	RINT1	Q6NUQ1	792 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	KANK3	Q6NY19	840 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	C1orf186	Q6ZWK4	172 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	SH3RF1	Q7Z6J0	888 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	PRPF31	Q8WWY3	499 aa	Known RBP	10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	IFT74	Q96LB3	600 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	PLIN2	Q99541	437 aa		10.06	□□□□□ -0.8
CIRBP-218	ENST00000588344	SH2D3A	Q9BRG2	576 aa		10.06	□□□□□ -0.8

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