RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 NACC1Q96RE7 527 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 USP28Q96RU2 1077 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 MAP7D2Q96T17 732 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 JPH2Q9BR39 696 aaPredicted RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 CYP26B1Q9NR63 512 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 ANKEF1Q9NU02 776 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 WRAP73Q9P2S5 460 aaPredicted RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 GINS2Q9Y248 185 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 PP2D1A8MPX8 630 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 NBNO60934 754 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 MAFO75444 373 aaPredicted RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 CHRNA1P02708 482 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 PFKMP08237 780 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 ACTN1P12814 892 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 MUTP22033 750 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 MARCKSP29966 332 aaPredicted RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 CDC25AP30304 524 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 RFC5P40937 340 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 UBA7P41226 1012 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 CLCN3P51790 818 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 POLGP54098 1239 aaPredicted RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 MRPS6P82932 125 aaKnown RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 CDC42EP1Q00587 391 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 PKP1Q13835 747 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 SLC39A14Q15043 492 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 PTPAQ15257 358 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 FAM26DQ5JW98 314 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 TMEM240Q5SV17 173 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 C9orf50Q5SZB4 431 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 PSRC1Q6PGN9 363 aaPredicted RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 OTOP2Q7RTS6 562 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 TDHQ8IZJ6 230 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 ZNF710Q8N1W2 664 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 LRRC71Q8N4P6 559 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 KCNV2Q8TDN2 545 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 SLC7A3Q8WY07 619 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 AK8Q96MA6 479 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.31□□□□□ -1.24
NPC1-206ENST00000587223 CELF4Q9BZC1 486 aaKnown RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 MTIF3Q9H2K0 278 aaKnown RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 PRO3102Q9H379 93 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 DDX19AQ9NUU7 478 aaKnown RBP7.31□□□□□ -1.24
NPC1-206ENST00000587223 CFAP45Q9UL16 551 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 DNM3Q9UQ16 869 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 AKT3Q9Y243 479 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 PPME1Q9Y570 386 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 TRPV2Q9Y5S1 764 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
NPC1-206ENST00000587223 IGKV6-21A0A0C4DH24 114 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 A0A1W2PPC1 479 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 ARHGEF35A5YM69 484 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 ZBBXA8MT70 800 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 SPTLC2O15270 562 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 MAP3K13O43283 966 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 BRD1O95696 1058 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 CXCL10P02778 98 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 VTNP04004 478 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 LONP1P36776 959 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 NLRP11P59045 1033 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 NUCB2P80303 420 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 MGAT3Q09327 533 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 IKBKEQ14164 716 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 GPNMBQ14956 572 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 ECM1Q16610 540 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 ATL3Q6DD88 541 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 CNKSR3Q6P9H4 555 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 CABP7Q86V35 215 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 RHPN2Q8IUC4 686 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 USP38Q8NB14 1042 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 DBF4BQ8NFT6 615 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 RASSF8Q8NHQ8 419 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 TCP11Q8WWU5 503 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 HERVK_113Q902F9 699 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 SEPT8Q92599 483 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 CALML4Q96GE6 196 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 RNPC3Q96LT9 517 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 SCLT1Q96NL6 688 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 PPP1R16BQ96T49 567 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 PLIN2Q99541 437 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 MTRQ99707 1265 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 BMP2KQ9NSY1 1161 aaPredicted RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 SUCLA2Q9P2R7 463 aaPredicted RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 DBR1Q9UK59 544 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 ATP6V1DQ9Y5K8 247 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 SQORQ9Y6N5 450 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 MKI67P46013 3256 aaKnown RBP7.3□□□□□ -1.24
NPC1-206ENST00000587223 SCN5AQ14524 2016 aa7.3□□□□□ -1.24
NPC1-206ENST00000587223 KDM3AQ9Y4C1 1321 aa7.29□□□□□ -1.24
NPC1-206ENST00000587223 ABHD14A-ACY1A0A1B0GW23 586 aa7.29□□□□□ -1.24
NPC1-206ENST00000587223 E9PMD0 336 aa7.29□□□□□ -1.24
NPC1-206ENST00000587223 TNRC18O15417 2968 aaPredicted RBP7.29□□□□□ -1.24
NPC1-206ENST00000587223 ASAP2O43150 1006 aa7.29□□□□□ -1.24
NPC1-206ENST00000587223 SLC26A4O43511 780 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms