RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ZSWIM4Q9H7M6 989 aa22.72■■□□□ 1.23
VAT1-203ENST00000587062 TTC12Q9H892 705 aaPredicted RBP22.72■■□□□ 1.23
VAT1-203ENST00000587062 C1orf112Q9NSG2 853 aa22.72■■□□□ 1.23
VAT1-203ENST00000587062 LMCD1Q9NZU5 365 aa22.72■■□□□ 1.23
VAT1-203ENST00000587062 PTPRSQ13332 1948 aa22.72■■□□□ 1.23
VAT1-203ENST00000587062 FAM205CA6NFA0 338 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 ZSCAN20P17040 1043 aaPredicted RBP22.71■■□□□ 1.23
VAT1-203ENST00000587062 ATP2B1P20020 1258 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 POU3F3P20264 500 aaPredicted RBP22.71■■□□□ 1.23
VAT1-203ENST00000587062 TARBP2Q15633 366 aaKnown RBP22.71■■□□□ 1.23
VAT1-203ENST00000587062 NPAS4Q8IUM7 802 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 C4orf19Q8IY42 314 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 LRRC71Q8N4P6 559 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 FIBCD1Q8N539 461 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 NEK9Q8TD19 979 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 SP7Q8TDD2 431 aaPredicted RBP22.71■■□□□ 1.23
VAT1-203ENST00000587062 SLC7A3Q8WY07 619 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 OSMRQ99650 979 aa22.71■■□□□ 1.23
VAT1-203ENST00000587062 INO80BQ9C086 356 aaPredicted RBP22.71■■□□□ 1.23
VAT1-203ENST00000587062 EML1O00423 815 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 TXKP42681 527 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 ADGRE1Q14246 886 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 FBXO22Q8NEZ5 403 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 NLRP7Q8WX94 980 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 CEP170P1Q96L14 293 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 CCDC43Q96MW1 224 aaKnown RBP22.7■■□□□ 1.22
VAT1-203ENST00000587062 TBC1D32Q96NH3 1257 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 PPP1R16BQ96T49 567 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 MTUS1Q9ULD2 1270 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 ST3GAL5Q9UNP4 418 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 NOC2LQ9Y3T9 749 aaKnown RBP22.7■■□□□ 1.22
VAT1-203ENST00000587062 PCDHB7Q9Y5E2 793 aa22.7■■□□□ 1.22
VAT1-203ENST00000587062 LAMA2P24043 3122 aaKnown RBP22.7■■□□□ 1.22
VAT1-203ENST00000587062 SIP14410 1827 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 GPR32O75388 356 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 MAFO75444 373 aaPredicted RBP22.69■■□□□ 1.22
VAT1-203ENST00000587062 EIF4BP23588 611 aaKnown RBP22.69■■□□□ 1.22
VAT1-203ENST00000587062 MCM7P33993 719 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 TRAPPC10P48553 1259 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 CCDC85BQ15834 202 aaPredicted RBP22.69■■□□□ 1.22
VAT1-203ENST00000587062 TMEM266Q2M3C6 531 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 MICALL1Q8N3F8 863 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 LXNQ9BS40 222 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 GCOM2Q9BZD3 368 aaPredicted RBP22.69■■□□□ 1.22
VAT1-203ENST00000587062 ERVK-5Q9HDB9 667 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 CYP26B1Q9NR63 512 aa22.69■■□□□ 1.22
VAT1-203ENST00000587062 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.69■■□□□ 1.22
VAT1-203ENST00000587062 GAS2O43903 313 aaKnown RBP22.68■■□□□ 1.22
VAT1-203ENST00000587062 YWHABP31946 246 aaKnown RBP22.68■■□□□ 1.22
VAT1-203ENST00000587062 RFC5P40937 340 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 POLGP54098 1239 aaPredicted RBP22.68■■□□□ 1.22
VAT1-203ENST00000587062 BTG3Q14201 252 aaPredicted RBP22.68■■□□□ 1.22
VAT1-203ENST00000587062 SLC24A5Q71RS6 500 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 ANO5Q75V66 913 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 NOSTRINQ8IVI9 506 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 TPH2Q8IWU9 490 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 LINC01465Q8N7H1 131 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 DYDC2Q96IM9 177 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 TMX3Q96JJ7 454 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 ADAM2Q99965 735 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 CDHR5Q9HBB8 845 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 LOXHD1Q8IVV2 1947 aa22.68■■□□□ 1.22
VAT1-203ENST00000587062 RFXAPO00287 272 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 SARSP49591 514 aaKnown RBP22.67■■□□□ 1.22
VAT1-203ENST00000587062 GPC3P51654 580 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 GRB10Q13322 594 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 PTPROQ16827 1216 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 ZNF410Q86VK4 478 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 ERMNQ8TAM6 284 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 TCP11Q8WWU5 503 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 EIF2AK1Q9BQI3 630 aaKnown RBP22.67■■□□□ 1.22
VAT1-203ENST00000587062 RGS18Q9NS28 235 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 SUCLA2Q9P2R7 463 aaPredicted RBP22.67■■□□□ 1.22
VAT1-203ENST00000587062 MTCH2Q9Y6C9 303 aa22.67■■□□□ 1.22
VAT1-203ENST00000587062 ADGRA3Q8IWK6 1321 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 IGKV6-21A0A0C4DH24 114 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 DGKIO75912 1065 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 ARHGEF15O94989 841 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 STBD1O95210 358 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 RB1P06400 928 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 SKIV2LQ15477 1246 aaKnown RBP22.66■■□□□ 1.22
VAT1-203ENST00000587062 XKR9Q5GH70 373 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 RTN4RL1Q86UN2 441 aaPredicted RBP22.66■■□□□ 1.22
VAT1-203ENST00000587062 TMEM192Q8IY95 271 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 TMEM40Q8WWA1 233 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 MTMR9Q96QG7 549 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 ADAMTS10Q9H324 1103 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 RGL1Q9NZL6 768 aa22.66■■□□□ 1.22
VAT1-203ENST00000587062 H3BQV1 296 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 ASAP2O43150 1006 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 DARSP14868 501 aaKnown RBP22.65■■□□□ 1.22
VAT1-203ENST00000587062 SFPQP23246 707 aaKnown RBP eCLIP22.65■■□□□ 1.22
VAT1-203ENST00000587062 CYP4A11Q02928 519 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 SPIRE1Q08AE8 756 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 CTTNQ14247 550 aaKnown RBP22.65■■□□□ 1.22
VAT1-203ENST00000587062 EPC2Q52LR7 807 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 TTC38Q5R3I4 469 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 PLA2G4FQ68DD2 849 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 FAM228AQ86W67 206 aa22.65■■□□□ 1.22
VAT1-203ENST00000587062 RHPN2Q8IUC4 686 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms