RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ZSCAN22P10073 491 aaPredicted RBP25.88■■□□□ 1.73
LSM7-202ENST00000585395 WDR5P61964 334 aaKnown RBP25.88■■□□□ 1.73
LSM7-202ENST00000585395 GPNMBQ14956 572 aa25.88■■□□□ 1.73
LSM7-202ENST00000585395 DBF4BQ8NFT6 615 aa25.88■■□□□ 1.73
LSM7-202ENST00000585395 TMEM60Q9H2L4 133 aa25.88■■□□□ 1.73
LSM7-202ENST00000585395 NRBP2Q9NSY0 501 aa25.88■■□□□ 1.73
LSM7-202ENST00000585395 MAFBQ9Y5Q3 323 aaPredicted RBP25.88■■□□□ 1.73
LSM7-202ENST00000585395 COL1A2P08123 1366 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 NBR1Q14596 966 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 ZNF484Q5JVG2 852 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 MARCH8Q5T0T0 291 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 BBXQ8WY36 941 aaPredicted RBP25.87■■□□□ 1.73
LSM7-202ENST00000585395 ZBTB10Q96DT7 871 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 ZNF396Q96N95 335 aaPredicted RBP25.87■■□□□ 1.73
LSM7-202ENST00000585395 CDY2AQ9Y6F7 541 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 IGSF9BQ9UPX0 1349 aa25.87■■□□□ 1.73
LSM7-202ENST00000585395 WDR81Q562E7 1941 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 P4HBP07237 508 aaKnown RBP25.86■■□□□ 1.73
LSM7-202ENST00000585395 PSMC5P62195 406 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 MRPS6P82932 125 aaKnown RBP25.86■■□□□ 1.73
LSM7-202ENST00000585395 FAM26DQ5JW98 314 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 IER5Q5VY09 327 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 ARL6IP4Q66PJ3 421 aaKnown RBP25.86■■□□□ 1.73
LSM7-202ENST00000585395 MTHFD1LQ6UB35 978 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 DTHD1Q6ZMT9 781 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 RPAINQ86UA6 219 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 HERC6Q8IVU3 1022 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 CERS4Q9HA82 394 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 C11orf16Q9NQ32 467 aa25.86■■□□□ 1.73
LSM7-202ENST00000585395 F13A1P00488 732 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 AMHP03971 560 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 GHRP10912 638 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 KLRC1P26715 233 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 QARSP47897 775 aaKnown RBP25.85■■□□□ 1.73
LSM7-202ENST00000585395 FXR2P51116 673 aaKnown RBP eCLIP25.85■■□□□ 1.73
LSM7-202ENST00000585395 ATP2C1P98194 919 aaPredicted RBP25.85■■□□□ 1.73
LSM7-202ENST00000585395 PLEKHG4Q58EX7 1191 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 APBB2Q92870 758 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 IFIH1Q9BYX4 1025 aaKnown RBP25.85■■□□□ 1.73
LSM7-202ENST00000585395 PCDHA2Q9Y5H9 948 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 MICAL3Q7RTP6 2002 aa25.85■■□□□ 1.73
LSM7-202ENST00000585395 SMIM35A0A1B0GVV1 85 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 EPOPA6NHQ4 379 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 TECP42680 631 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 DEFB103AP81534 67 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 TMEM62Q0P6H9 643 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 PDIA5Q14554 519 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 HAUS3Q68CZ6 603 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 FAM117BQ6P1L5 589 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 MYOCDQ8IZQ8 938 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 C4orf32Q8N8J7 132 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 ARNTL2Q8WYA1 636 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 ATP6V1DQ9Y5K8 247 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 TRPV2Q9Y5S1 764 aa25.84■■□□□ 1.73
LSM7-202ENST00000585395 EVPLQ92817 2033 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 CHRNA1P02708 482 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 OATP04181 439 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 PRKCEQ02156 737 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 TAP1Q03518 808 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 SPIRE1Q08AE8 756 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 XKR3Q5GH77 459 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 METTL13Q8N6R0 699 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 ZSWIM4Q9H7M6 989 aa25.83■■□□□ 1.73
LSM7-202ENST00000585395 PI4K2BG5E9Z4 385 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 EML1O00423 815 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 SF3A1Q15459 793 aaKnown RBP25.82■■□□□ 1.72
LSM7-202ENST00000585395 TCTN1Q2MV58 587 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 ATL3Q6DD88 541 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 KHSRPQ92945 711 aaKnown RBP eCLIP25.82■■□□□ 1.72
LSM7-202ENST00000585395 LRWD1Q9UFC0 647 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 GINS2Q9Y248 185 aa25.82■■□□□ 1.72
LSM7-202ENST00000585395 PTPRSQ13332 1948 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 ATP4AP20648 1035 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 NUCB2P80303 420 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 MGAT3Q09327 533 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 OTUD6AQ7L8S5 288 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 TMCO2Q7Z6W1 182 aaPredicted RBP25.81■■□□□ 1.72
LSM7-202ENST00000585395 NME8Q8N427 588 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 BANK1Q8NDB2 785 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 EIF2AK1Q9BQI3 630 aaKnown RBP25.81■■□□□ 1.72
LSM7-202ENST00000585395 SEPT9Q9UHD8 586 aaPredicted RBP25.81■■□□□ 1.72
LSM7-202ENST00000585395 SIP14410 1827 aa25.81■■□□□ 1.72
LSM7-202ENST00000585395 POTEMA6NI47 508 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 FOXD4L5Q5VV16 416 aaPredicted RBP25.8■■□□□ 1.72
LSM7-202ENST00000585395 TSHZ1Q6ZSZ6 1077 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 C4orf19Q8IY42 314 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 FOXD4L4Q8WXT5 416 aaPredicted RBP25.8■■□□□ 1.72
LSM7-202ENST00000585395 MAP7D2Q96T17 732 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 LXNQ9BS40 222 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 TUFT1Q9NNX1 390 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 PPME1Q9Y570 386 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 LOXHD1Q8IVV2 1947 aa25.8■■□□□ 1.72
LSM7-202ENST00000585395 FAM86C2PA6NEL3 165 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 MAGEB2O15479 319 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 BRD1O95696 1058 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 MUTP22033 750 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 TMOD1P28289 359 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 GRB10Q13322 594 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 LPIN1Q14693 890 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 UGCGQ16739 394 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms