RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 HOXD8P13378 290 aaPredicted RBP15.46■□□□□ 0.06
UBBP4-202ENST00000584755 PLS3P13797 630 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 EEF1GP26641 437 aaKnown RBP15.46■□□□□ 0.06
UBBP4-202ENST00000584755 SLC26A2P50443 739 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 RTP1P59025 263 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 HSP90AA4PQ58FG1 418 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 TCP11X2Q5H9J9 407 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 ODR4Q5SWX8 454 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 LRRC55Q6ZSA7 311 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 FAM178BQ8IXR5 827 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 PPTC7Q8NI37 304 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 KIFAP3Q92845 792 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 TSG101Q99816 390 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 SH2D3AQ9BRG2 576 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 ST6GALNAC4Q9H4F1 302 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 AZI2Q9H6S1 392 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 C17orf75Q9HAS0 396 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 XPNPEP1Q9NQW7 623 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 NRBP2Q9NSY0 501 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 INTS13Q9NVM9 706 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 FLRT1Q9NZU1 646 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.06
UBBP4-202ENST00000584755 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 KCNJ18B7U540 433 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 PDXKO00764 312 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 GCNT3O95395 438 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 XRCC5P13010 732 aaKnown RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 SMPD1P17405 629 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 FCGRTP55899 365 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 LACTBP83111 547 aaPredicted RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 ALCAMQ13740 583 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 KCNJ12Q14500 433 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 NR1I3Q14994 352 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 KNOP1Q1ED39 458 aaKnown RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 SLC17A8Q8NDX2 589 aa15.45■□□□□ 0.06
UBBP4-202ENST00000584755 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
UBBP4-202ENST00000584755 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 PRPF6O94906 941 aaKnown RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 FGFR1OPO95684 399 aaKnown RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 ZNF865P0CJ78 1059 aaPredicted RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 NMT1P30419 496 aaKnown RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 MAP2K2P36507 400 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 NCKAP1LP55160 1127 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 KRT31Q15323 416 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 CCDC144BQ3MJ40 725 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 FAM114A1Q8IWE2 563 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 ATP8B4Q8TF62 1192 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 SPIRE2Q8WWL2 714 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 KCNN1Q92952 543 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 NTPCRQ9BSD7 190 aaKnown RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 SMARCAD1Q9H4L7 1026 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 ATP6V0A4Q9HBG4 840 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 GPRC5CQ9NQ84 441 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 ZHX1Q9UKY1 873 aaPredicted RBP15.44■□□□□ 0.06
UBBP4-202ENST00000584755 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
UBBP4-202ENST00000584755 TPM3P06753 285 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 CYP2B6P20813 491 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 PTGS1P23219 599 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 RFC5P40937 340 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 PSMC4P43686 418 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
UBBP4-202ENST00000584755 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 CCL14Q16627 93 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 NFIL3Q16649 462 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 MTERF2Q49AM1 385 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
UBBP4-202ENST00000584755 MAEAQ7L5Y9 396 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 TRMT1LQ7Z2T5 733 aaKnown RBP15.43■□□□□ 0.06
UBBP4-202ENST00000584755 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 ANKRD20A12PQ8NF67 263 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
UBBP4-202ENST00000584755 TYW1Q9NV66 732 aaKnown RBP15.43■□□□□ 0.06
UBBP4-202ENST00000584755 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
UBBP4-202ENST00000584755 ZSWIM8A7E2V4 1837 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 GOLGA6L6A8MZA4 724 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 ADCY6O43306 1168 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 PPFIA4O75335 1185 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 COPB1P53618 953 aaKnown RBP15.42■□□□□ 0.06
UBBP4-202ENST00000584755 GTF2BQ00403 316 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 EMC2Q15006 297 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 FAM102BQ5T8I3 360 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 TRIM50Q86XT4 487 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 VSTM4Q8IW00 320 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 SPC24Q8NBT2 197 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 TMEM174Q8WUU8 243 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 AFG1LQ8WV93 481 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 GLG1Q92896 1179 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 CNOT6LQ96LI5 555 aaKnown RBP15.42■□□□□ 0.06
UBBP4-202ENST00000584755 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 NRBP1Q9UHY1 535 aa15.42■□□□□ 0.06
UBBP4-202ENST00000584755 GNEQ9Y223 722 aaKnown RBP15.42■□□□□ 0.06
UBBP4-202ENST00000584755 ZBTB42B2RXF5 422 aa15.41■□□□□ 0.06
UBBP4-202ENST00000584755 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
UBBP4-202ENST00000584755 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
UBBP4-202ENST00000584755 MAFO75444 373 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms