RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
TOP3A-218ENST00000584669 NEMFO60524 1076 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 RPLP2P05387 115 aaKnown RBP23.31■■□□□ 1.32
TOP3A-218ENST00000584669 BMP1P13497 986 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 SPIRE1Q08AE8 756 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 FBXO47Q5MNV8 452 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 IER5Q5VY09 327 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 NCAPH2Q6IBW4 605 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 SLFN12Q8IYM2 578 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 TOP1MTQ969P6 601 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 TMEM60Q9H2L4 133 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 LMCD1Q9NZU5 365 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
TOP3A-218ENST00000584669 M0QZ92 97 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 GJB2P29033 226 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 MCM7P33993 719 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 GNL2Q13823 731 aaKnown RBP23.3■■□□□ 1.32
TOP3A-218ENST00000584669 NOSTRINQ8IVI9 506 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 NME8Q8N427 588 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 METTL13Q8N6R0 699 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 SP7Q8TDD2 431 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-218ENST00000584669 SH2D3AQ9BRG2 576 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 CELF4Q9BZC1 486 aaKnown RBP23.3■■□□□ 1.32
TOP3A-218ENST00000584669 AGO3Q9H9G7 860 aaKnown RBP23.3■■□□□ 1.32
TOP3A-218ENST00000584669 SEPT9Q9UHD8 586 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-218ENST00000584669 NLRC5Q86WI3 1866 aa23.3■■□□□ 1.32
TOP3A-218ENST00000584669 CLCN3P51790 818 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 TTC3P53804 2025 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 PSMC5P62195 406 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 MTMR9Q96QG7 549 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 PPP1R16BQ96T49 567 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 CDHR5Q9HBB8 845 aa23.29■■□□□ 1.32
TOP3A-218ENST00000584669 WRAP73Q9P2S5 460 aaPredicted RBP23.29■■□□□ 1.32
TOP3A-218ENST00000584669 VTNP04004 478 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 TXKP42681 527 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 QARSP47897 775 aaKnown RBP23.28■■□□□ 1.32
TOP3A-218ENST00000584669 EPHA7Q15375 998 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 TARBP2Q15633 366 aaKnown RBP23.28■■□□□ 1.32
TOP3A-218ENST00000584669 ZNF174Q15697 407 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 MTERF2Q49AM1 385 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 EPC2Q52LR7 807 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 XKR3Q5GH77 459 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 EFCAB12Q6NXP0 572 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 TSHZ1Q6ZSZ6 1077 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 LRRC71Q8N4P6 559 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 NIFKQ9BYG3 293 aaKnown RBP23.28■■□□□ 1.32
TOP3A-218ENST00000584669 TTC12Q9H892 705 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-218ENST00000584669 RGL1Q9NZL6 768 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 PCDHA12Q9UN75 941 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 KIF3AQ9Y496 699 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 KDM3AQ9Y4C1 1321 aa23.28■■□□□ 1.32
TOP3A-218ENST00000584669 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 MAGEB2O15479 319 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 U2AF2P26368 475 aaKnown RBP eCLIP23.27■■□□□ 1.32
TOP3A-218ENST00000584669 CD52P31358 61 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 TTC38Q5R3I4 469 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 PLA2G4FQ68DD2 849 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 LINC01465Q8N7H1 131 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 DYDC2Q96IM9 177 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 SAMD11Q96NU1 681 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 CEP89Q96ST8 783 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 SMC3Q9UQE7 1217 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 GINS2Q9Y248 185 aa23.27■■□□□ 1.32
TOP3A-218ENST00000584669 P4HBP07237 508 aaKnown RBP23.26■■□□□ 1.31
TOP3A-218ENST00000584669 CYP4A11Q02928 519 aa23.26■■□□□ 1.31
TOP3A-218ENST00000584669 TBC1D8BQ0IIM8 1120 aa23.26■■□□□ 1.31
TOP3A-218ENST00000584669 CTTNQ14247 550 aaKnown RBP23.26■■□□□ 1.31
TOP3A-218ENST00000584669 NBR1Q14596 966 aa23.26■■□□□ 1.31
TOP3A-218ENST00000584669 ANO5Q75V66 913 aa23.26■■□□□ 1.31
TOP3A-218ENST00000584669 TMEM192Q8IY95 271 aa23.26■■□□□ 1.31
TOP3A-218ENST00000584669 GPM6BQ13491 265 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 PTPROQ16827 1216 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 KIZQ2M2Z5 673 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 TMEM266Q2M3C6 531 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 MCTP1Q6DN14 999 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 TMEM40Q8WWA1 233 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 LXNQ9BS40 222 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.25■■□□□ 1.31
TOP3A-218ENST00000584669 SQORQ9Y6N5 450 aa23.25■■□□□ 1.31
TOP3A-218ENST00000584669 POTEMA6NI47 508 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 GPR32O75388 356 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 CTNNB1P35222 781 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 TOB1P50616 345 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 NPEPPSP55786 919 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 DRP2Q13474 957 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 CUL4AQ13619 759 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 FIBCD1Q8N539 461 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 ZNF579Q8NAF0 562 aaKnown RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 MRPL38Q96DV4 380 aaKnown RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 ZNF668Q96K58 619 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 OSMRQ99650 979 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 EIF2AK1Q9BQI3 630 aaKnown RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 UBE2ZQ9H832 354 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 PADI3Q9ULW8 664 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 NOL7Q9UMY1 257 aaKnown RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 AKT3Q9Y243 479 aa23.24■■□□□ 1.31
TOP3A-218ENST00000584669 NOC2LQ9Y3T9 749 aaKnown RBP23.24■■□□□ 1.31
TOP3A-218ENST00000584669 SPTBN5Q9NRC6 3674 aaKnown RBP23.23■■□□□ 1.31
TOP3A-218ENST00000584669 REV3LO60673 3130 aa23.23■■□□□ 1.31
TOP3A-218ENST00000584669 DKC1O60832 514 aaKnown RBP eCLIP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms