RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 KAZNQ674X7 775 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 FAM20AQ96MK3 541 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 MST1RQ04912 1400 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 OPHN1O60890 802 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 MAPK4P31152 587 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
ERBB2-219ENST00000584601 LMNB2Q03252 620 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 RNASELQ05823 741 aaKnown RBP13.14□□□□□ -0.31
ERBB2-219ENST00000584601 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 TRIM4Q9C037 500 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 EPN3Q9H201 632 aa13.14□□□□□ -0.31
ERBB2-219ENST00000584601 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 PABPN1LA6NDY0 278 aaKnown RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 PODXLO00592 558 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 ABCD1P33897 745 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 MDH1P40925 334 aaKnown RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 TFDP1Q14186 410 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 CASC4Q6P4E1 433 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 PARP9Q8IXQ6 854 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 MAP7Q14244 749 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 PTPAQ15257 358 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 FBXL5Q9UKA1 691 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 FLT1P17948 1338 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 FCER1AP12319 257 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 ELOA2Q8IYF1 753 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 HACE1Q8IYU2 909 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 MXI1P50539 228 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 MYO1EQ12965 1108 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 HADHQ16836 314 aaKnown RBP13.13□□□□□ -0.31
ERBB2-219ENST00000584601 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 21.9
ERBB2-219ENST00000584601 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 SSX2IPQ9Y2D8 614 aa13.13□□□□□ -0.31
ERBB2-219ENST00000584601 E9PMD0 336 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 H3BQF6 201 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 KRT14P02533 472 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 ARL1P40616 181 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 CCNA1P78396 465 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 IRX4P78413 519 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TAF12Q16514 161 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TAB3Q8N5C8 712 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 FAM81BQ96LP2 452 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 STAM2O75886 525 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PSAPP07602 524 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PSMD6Q15008 389 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 GPR162Q16538 588 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 ZNF449Q6P9G9 518 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 UBE2TQ9NPD8 197 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TDP2O95551 362 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 IGBP1P78318 339 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 TRIP13Q15645 432 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
ERBB2-219ENST00000584601 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 RICTORQ6R327 1708 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 KIF3CO14782 793 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 LSP1P33241 339 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 SEPT6Q14141 434 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 RASA3Q14644 834 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 WDR93Q6P2C0 686 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 CCSER1Q9C0I3 900 aa13.12□□□□□ -0.31
ERBB2-219ENST00000584601 EXOC1LA0A1B0GW35 172 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
ERBB2-219ENST00000584601 POTECB2RU33 542 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 CA4P22748 312 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 COASYQ13057 564 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
ERBB2-219ENST00000584601 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 MS4A14Q96JA4 679 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 PITPNM3Q9BZ71 974 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 MIS12Q9H081 205 aa13.11□□□□□ -0.31
ERBB2-219ENST00000584601 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms