RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 FGFR1OPO95684 399 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HSPA8P11142 646 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ACADSP16219 412 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LMNB1P20700 586 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KCNJ2P63252 427 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ATP11AP98196 1134 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LENG1Q96BZ8 264 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TTLL3Q9Y4R7 772 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MYH7P12883 1935 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 YDJCA8MPS7 323 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SEMA3EO15041 775 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ITGA2BP08514 1039 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SCG2P13521 617 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 EPHB4P54760 987 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GUCY2DQ02846 1103 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 FAM47AQ5JRC9 791 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ATP6V1G3Q96LB4 118 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HAPLN3Q96S86 360 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TIPINQ9BVW5 301 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ABCF3Q9NUQ8 709 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DKK3Q9UBP4 350 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 USH1CQ9Y6N9 552 aa12.86□□□□□ -0.35
CDK5RAP3-232ENST00000584168 NMT2O60551 498 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ALDH2P05091 517 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCNFP41002 786 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SYKP43405 635 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CPLX4Q7Z7G2 160 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TTC30BQ8N4P2 665 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SSX2IPQ9Y2D8 614 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 COMMD3-BMI1R4GMX3 469 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 A8MUI8 341 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ASLP04424 464 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PYGMP11217 842 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BCL2A1Q16548 175 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MYO1HQ8N1T3 1032 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SYT2Q8N9I0 419 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MRPL46Q9H2W6 279 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BIRC5O15392 142 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GNAZP19086 355 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GNAT2P19087 354 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MYL5Q02045 173 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PPARAQ07869 468 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PAK2Q13177 524 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CFAP58Q5T655 872 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 C15orf52Q6ZUT6 534 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LRRC49Q8IUZ0 686 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PPP1R12CQ9BZL4 782 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 INTUQ9ULD6 942 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ZNF711Q9Y462 761 aa12.85□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TACC1O75410 805 aa12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PEX5P50542 639 aa12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PLCD1P51178 756 aa12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HPCAP84074 193 aa12.84□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PDE1BQ01064 536 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms