RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	ZNF396	Q96N95	335 aa	Predicted RBP	11.05	□□□□□ -0.64
NARF-222	ENST00000583908	MTR	Q99707	1265 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	NT5C3A	Q9H0P0	336 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	ATP6V0A4	Q9HBG4	840 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	RGL1	Q9NZL6	768 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	DAXX	Q9UER7	740 aa	Predicted RBP	11.05	□□□□□ -0.64
NARF-222	ENST00000583908	TRIOBP	Q9H2D6	2365 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	ARHGEF35	A5YM69	484 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	WNT7A	O00755	349 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	ASAP2	O43150	1006 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	MAF	O75444	373 aa	Predicted RBP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	RPS6KA5	O75582	802 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	SLITRK3	O94933	977 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	SFPQ	P23246	707 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	TOB1	P50616	345 aa	Predicted RBP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	CLCN3	P51790	818 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	TMEM62	Q0P6H9	643 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	TFDP1	Q14186	410 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	MXD4	Q14582	209 aa	Predicted RBP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	EMC2	Q15006	297 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	FBXO47	Q5MNV8	452 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	ZNF697	Q5TEC3	545 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	RASIP1	Q5U651	963 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	PLA2G4F	Q68DD2	849 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	TRAF7	Q6Q0C0	670 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	ANO5	Q75V66	913 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	IGSF22	Q8N9C0	903 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	MCPH1	Q8NEM0	835 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	CALML4	Q96GE6	196 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	HSD17B14	Q9BPX1	270 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	ZBED2	Q9BTP6	218 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	DBR1	Q9UK59	544 aa	Known RBP	11.04	□□□□□ -0.64
NARF-222	ENST00000583908	MTMR6	Q9Y217	621 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	ATP6V1D	Q9Y5K8	247 aa		11.04	□□□□□ -0.64
NARF-222	ENST00000583908	VWA3A	A6NCI4	1184 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	CHRNA1	P02708	482 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	LONP1	P36776	959 aa	Known RBP	11.03	□□□□□ -0.64
NARF-222	ENST00000583908	FXR1	P51114	621 aa	Known RBP eCLIP	11.03	□□□□□ -0.64	3e-9	■■□□□ 14.5
NARF-222	ENST00000583908	WDR5	P61964	334 aa	Known RBP	11.03	□□□□□ -0.64
NARF-222	ENST00000583908	REST	Q13127	1097 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	LPIN1	Q14693	890 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	MBTPS1	Q14703	1052 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	KIZ	Q2M2Z5	673 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	C16orf59	Q7L2K0	433 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	CATSPER3	Q86XQ3	398 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	KIAA0319L	Q8IZA0	1049 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	LRRC71	Q8N4P6	559 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	DBF4B	Q8NFT6	615 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.03	□□□□□ -0.64
NARF-222	ENST00000583908	DNM3	Q9UQ16	869 aa		11.03	□□□□□ -0.64
NARF-222	ENST00000583908	RANBP2	P49792	3224 aa	Known RBP	11.02	□□□□□ -0.64
NARF-222	ENST00000583908	DENND3	A2RUS2	1198 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	TLL1	O43897	1013 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	VTN	P04004	478 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	STAG3L1	P0CL83	205 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	ZSCAN22	P10073	491 aa	Predicted RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	ZSCAN20	P17040	1043 aa	Predicted RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	DNAJB2	P25686	324 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	UBA7	P41226	1012 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	PHKA2	P46019	1235 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	RARRES1	P49788	294 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	GPC3	P51654	580 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	NLRP11	P59045	1033 aa	Known RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	NCBP1	Q09161	790 aa	Known RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	NFX1	Q12986	1120 aa	Known RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.02	□□□□□ -0.65	9e-6	■■■□□ 18.2
NARF-222	ENST00000583908	SF3A1	Q15459	793 aa	Known RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	ATL3	Q6DD88	541 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	POTEG	Q6S5H5	508 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	RHPN2	Q8IUC4	686 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	HERC6	Q8IVU3	1022 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	MYOCD	Q8IZQ8	938 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	C4orf32	Q8N8J7	132 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	TIFA	Q96CG3	184 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	ZBTB10	Q96DT7	871 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	NLRP4	Q96MN2	994 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	OSMR	Q99650	979 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	DHX33	Q9H6R0	707 aa	Known RBP	11.02	□□□□□ -0.65
NARF-222	ENST00000583908	SLC28A3	Q9HAS3	691 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	C1orf112	Q9NSG2	853 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	PCDH10	Q9P2E7	1040 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	CFAP45	Q9UL16	551 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	PCDHA11	Q9Y5I1	949 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	COL4A3BP	Q9Y5P4	624 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	PHLPP2	Q6ZVD8	1323 aa		11.02	□□□□□ -0.65
NARF-222	ENST00000583908	TRIP12	Q14669	1992 aa	Predicted RBP	11.01	□□□□□ -0.65
NARF-222	ENST00000583908	IGKV6-21	A0A0C4DH24	114 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	USO1	O60763	962 aa	Known RBP	11.01	□□□□□ -0.65
NARF-222	ENST00000583908	MED24	O75448	989 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	STBD1	O95210	358 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	EIF4B	P23588	611 aa	Known RBP	11.01	□□□□□ -0.65
NARF-222	ENST00000583908	CD52	P31358	61 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	NPEPPS	P55786	919 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	PPP2R5A	Q15172	486 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	STK38	Q15208	465 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	ZRSR1	Q15695	479 aa	Known RBP	11.01	□□□□□ -0.65
NARF-222	ENST00000583908	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.01	□□□□□ -0.65
NARF-222	ENST00000583908	LINC01465	Q8N7H1	131 aa		11.01	□□□□□ -0.65
NARF-222	ENST00000583908	PIGO	Q8TEQ8	1089 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms