RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 UTP14CQ5TAP6 766 aaKnown RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 TAF2Q6P1X5 1199 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 RSPH3Q86UC2 560 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 RTN4RL1Q86UN2 441 aaPredicted RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 HOMER1Q86YM7 354 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 GPR161Q8N6U8 529 aaKnown RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 PRSS33Q8NF86 280 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 SPPL3Q8TCT6 385 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 LMBR1Q8WVP7 490 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 P2RX5Q93086 422 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 MSLNLQ96KJ4 702 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 INPP4AQ96PE3 977 aaPredicted RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 PIGSQ96S52 555 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 SENP7Q9BQF6 1050 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 DSCC1Q9BVC3 393 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 FAM117AQ9C073 453 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 CNNM2Q9H8M5 875 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 ALG13Q9NP73 1137 aaKnown RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 CLEC1BQ9P126 229 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 TELO2Q9Y4R8 837 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 ADGRA3Q8IWK6 1321 aa6.15□□□□□ -1.43
VAPA-207ENST00000583879 TANC1Q9C0D5 1861 aa6.15□□□□□ -1.43
VAPA-207ENST00000583879 COL4A4P53420 1690 aaPredicted RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 TTLL8A6PVC2 850 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 LOC730098B7Z3J9 87 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 CFAP99D6REC4 459 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 CYTH3O43739 400 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 ATP9AO75110 1047 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 ITGB1P05556 798 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 DNAJB1P25685 340 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 NDUFV1P49821 464 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 RRP1P56182 461 aaKnown RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 ZXDAP98168 799 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 PTSQ03393 145 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 MGAT3Q09327 533 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 TCF15Q12870 199 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 COASYQ13057 564 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 CBX2Q14781 532 aaPredicted RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 SLC35G1Q2M3R5 365 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 FBXO47Q5MNV8 452 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 XRRA1Q6P2D8 792 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 RUFY4Q6ZNE9 571 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 CYB5R4Q7L1T6 521 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 NLRX1Q86UT6 975 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 TRIM50Q86XT4 487 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 SUGP1Q8IWZ8 645 aaKnown RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 EFHBQ8N7U6 833 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 KLHL23Q8NBE8 558 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 GIMAP8Q8ND71 665 aaPredicted RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 DNAJB3Q8WWF6 145 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 SEPT1Q8WYJ6 367 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 LNPKQ9C0E8 428 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 OSBPL3Q9H4L5 887 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 AGO3Q9H9G7 860 aaKnown RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 DIAPH3Q9NSV4 1193 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 SUPT16HQ9Y5B9 1047 aaKnown RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 SQORQ9Y6N5 450 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 PTPRSQ13332 1948 aa6.14□□□□□ -1.43
VAPA-207ENST00000583879 TRIP12Q14669 1992 aaPredicted RBP6.14□□□□□ -1.43
VAPA-207ENST00000583879 GSTTP1A0A1W2PQM5 241 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 MBLAC1A4D2B0 266 aaPredicted RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 HIP1O00291 1037 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 CSPG5O95196 566 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 STAG3L1P0CL83 205 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 FSHRP23945 695 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 TCF7P36402 384 aaPredicted RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 NRIP1P48552 1158 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 SP4Q02446 784 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 TROAPQ12815 778 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 GRM4Q14833 912 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 GRIK4Q16099 956 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 MARCH8Q5T0T0 291 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 IER5Q5VY09 327 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 PCNX4Q63HM2 1172 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 USP17L6PQ6QN14 398 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 TSHZ1Q6ZSZ6 1077 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 ADGRD2Q7Z7M1 963 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 RBM23Q86U06 439 aaKnown RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 NPAS4Q8IUM7 802 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 PLEKHM2Q8IWE5 1019 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 CMTR2Q8IYT2 770 aaKnown RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 SVOPQ8N4V2 548 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 FBXL6Q8N531 539 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 SMRP1Q8NCR6 262 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 ARMC2Q8NEN0 867 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 SMARCC2Q8TAQ2 1214 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 MICAL1Q8TDZ2 1067 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 POF1BQ8WVV4 589 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 PHF7Q9BWX1 381 aaPredicted RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 FTHL17Q9BXU8 183 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 IRF2BPLQ9H1B7 796 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 SMARCAD1Q9H4L7 1026 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 ERAP1Q9NZ08 941 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 LIMD1Q9UGP4 676 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 CDY2AQ9Y6F7 541 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
VAPA-207ENST00000583879 FRMPD4Q14CM0 1322 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms