RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KLRC1P26715 233 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 POLGP54098 1239 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 PTPN11Q06124 597 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 HIC1Q14526 733 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 E2F4Q16254 413 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 SV2BQ7L1I2 683 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 METTL13Q8N6R0 699 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 SUGCTQ9HAC7 445 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 GTF2IRD1Q9UHL9 959 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 COL1A2P08123 1366 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 MAGEB2O15479 319 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 TREHO43280 583 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
TOP3A-216ENST00000583804 PQBP1O60828 265 aaKnown RBP12.17□□□□□ -0.46
TOP3A-216ENST00000583804 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 PTGISQ16647 500 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 MARCH8Q5T0T0 291 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 SLC7A3Q8WY07 619 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 TRPV6Q9H1D0 765 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 TRMT13Q9NUP7 481 aaKnown RBP12.17□□□□□ -0.46
TOP3A-216ENST00000583804 USP25Q9UHP3 1055 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 BRCA2P51587 3418 aa12.17□□□□□ -0.46
TOP3A-216ENST00000583804 DGAT1O75907 488 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 C22orf31O95567 290 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 KRT18P05783 430 aaKnown RBP12.16□□□□□ -0.46
TOP3A-216ENST00000583804 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 CYP2C9P11712 490 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 RFC5P40937 340 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 MRE11P49959 708 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 CDK7P50613 346 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 POSTNQ15063 836 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 TRIM60Q495X7 471 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 EFCAB12Q6NXP0 572 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 GPBP1Q86WP2 473 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 EXOC8Q8IYI6 725 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 MTRQ99707 1265 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 JPH2Q9BR39 696 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-216ENST00000583804 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 ATP11BQ9Y2G3 1177 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 PCDHA2Q9Y5H9 948 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 WDR81Q562E7 1941 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 SCN10AQ9Y5Y9 1956 aa12.16□□□□□ -0.46
TOP3A-216ENST00000583804 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
TOP3A-216ENST00000583804 B4GALT4O60513 344 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 MAFO75444 373 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-216ENST00000583804 CYP11B2P19099 503 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 TMOD1P28289 359 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 HOXC8P31273 242 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 RGS19P49795 217 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 AMPD3Q01432 767 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 TLE2Q04725 743 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 CUL4BQ13620 913 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 EMC2Q15006 297 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 LRRC26Q2I0M4 334 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 LRRC71Q8N4P6 559 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 CCDC34Q96HJ3 373 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 CEP89Q96ST8 783 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 RUSC1Q9BVN2 902 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 LRRC27Q9C0I9 530 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 FAM49AQ9H0Q0 323 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-216ENST00000583804 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
TOP3A-216ENST00000583804 ATP6V0A4Q9HBG4 840 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 MROH7Q68CQ1 1323 aa12.15□□□□□ -0.46
TOP3A-216ENST00000583804 MBLAC1A4D2B0 266 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-216ENST00000583804 MYMKA6NI61 221 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 DNM2P50570 870 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 CLCN3P51790 818 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 RTP1P59025 263 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 ADAM17P78536 824 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 ARSHQ5FYA8 562 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 MCPH1Q8NEM0 835 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 DNAJB3Q8WWF6 145 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms